Pseudoliparis swirei (Mariana hadal snailfish): 130194797
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Entry
130194797 CDS
T09868
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03020
RNA polymerase
pswi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130194797 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
130194797 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130194797 (polr2c)
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130194797 (polr2c)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
130194797 (polr2c)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130194797 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
130194797
NCBI-ProteinID:
XP_056271943
LinkDB
All DBs
Position
6:28370300..28376545
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFIIENTDLAVANSIRRVFMSEVATIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDIILVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYTEIEEDEVEAPYDPNGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacggtgaaaatcacagaactgacggacgagaatgtgaag
ttcatcattgagaacaccgacctggcggtggccaactccatccgccgtgtgttcatgtcg
gaagtcgccaccatagcgatcgactggatccagatcgacgccaactcctcggtgctgcac
gacgagttcatcgctcacagagtcggtctcattccgctcacaagtgacgacatcgtggat
aagatgcagtattctcgggactgcacctgtgacgacttctgtccggagtgttccgtggag
ttgacgctggacgtccggtgcaccgaggaccagacgcgccacgtgacctcgcgcgacctt
ttgtccaacaaccccagagtcatcccggtgacttccaggagtcgagacaacgaccccaac
gactacgtggaacaagatgacatcatcctggtgaagctgcgtaagggccaggagctccgg
ctcagggcgtacgccaagaagggcttcggcaaggagcacgccaagtggaaccccacggcg
ggggtgtccttcgagtacgacccggacaacgcgctgaggcacacggtgttcccccgaccc
gaggagtggccgaagagcgaatataccgagatcgaggaggacgaggttgaggcgccctac
gaccccaacgggaagccggagaggttcttctacaacgtggagtcgtgcggctcgctgcgg
cccgagaccatcgtgatgtcggcgctggccgtcctcaagaagaagctcagcgaccttcag
acgcagctgagccacgagatccagagcgacgtgctcaccatcaactga
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