Pseudoliparis swirei (Mariana hadal snailfish): 130202895
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Entry
130202895 CDS
T09868
Symbol
esr1
Name
(RefSeq) estrogen receptor isoform X1
KO
K08550
estrogen receptor alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130202895 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pswi03310
]
130202895 (esr1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
130202895 (esr1)
Nuclear receptors [BR:
pswi03310
]
3. Estrogen like
3A. Estrogen receptor
130202895 (esr1)
BRITE hierarchy
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130202895
NCBI-ProteinID:
XP_056284714
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All DBs
Position
12:10451367..10464355
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AA seq
674 aa
AA seq
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MGGAFLISFSFFPLFFHCSNLVGGSLRQIGERDWKNSGHFKLPDGLCWNKGKRQSPAQSR
QPCGPVVGPRISPALSELETLSPHRPSPPPRAHFSDMYPEESRGSGGVATVDFLEATYDY
AAPTPAPTPLYSHSTPGYYSAPLDSHRPPSDGSLQSLGSGPASPLVFVPSSPRLSPFLHP
PSHHYLETTSTHVYSVPSSQQSVPREDQCGPSDESYSLGESGAGAGAGGFEMAKDTRFCA
VCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQACRLRKCY
EVGMMKGGVRKDRGRILRRDKRRTGTGDRDKASKNLEPRTGPAQDGRKRSSSACAGGKSL
VTSMPPDQVLLLLQCAEPPILCSRQKLSRPYTEVTMMTLLTSMADKELVHMITWAKKLPG
FLQLGLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGDCVEGMAEIFD
MLLATASRFRLLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHDTAAVQHMLDTITDTL
IHHISQSGGPVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLLLEMLDA
HRLHRPDKPGEPWFNADGEPLSTASNDNNNSSSSGGGGFSGGSGSGPRVSLESPSRAPTV
LQYGGSHSDCTHIL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcctttttgatatctttttccttttttcccctttttttccattgcagtaac
ttggtgggcggaagcttaaggcagataggggaaagagactggaagaatagtggacacttc
aagttgccggacgggctttgttggaataaaggcaagaggcagagcccagcgcagagcaga
caaccttgtggaccagtagtcggacccaggatcagcccagccctctcagaactggagacc
ctctccccgcaccgaccctcacctccaccacgtgcccacttcagtgacatgtaccctgaa
gagagccgggggtctggaggggtagccactgtagacttcctggaagcgacatacgactat
gccgctcccacccctgccccgactcctctttacagccactccacccctggctactactcc
gctcctctggactcccacagaccaccctcagatggcagtcttcagtccctggggagtggg
cccgccagtcctctagtgtttgtaccctccagcccccgactcagtccctttttgcaccca
cccagccaccactatttggaaaccacctcaacacacgtctacagcgtcccatccagtcag
cagtcggttcccagagaagaccagtgcggccccagtgacgagtcttacagtctgggggag
tcgggggccggagcgggggccgggggctttgagatggccaaagatacgcgtttctgtgcc
gtgtgcagcgactacgcctctgggtaccactacggggtgtggtcctgtgagggctgcaag
gccttcttcaagaggagcatccagggtcacaatgactatatgtgcccagcaaccaatcag
tgcactattgacaggaatcggaggaagagctgccaggcgtgtcgtcttaggaagtgttac
gaagtgggcatgatgaaaggaggtgtgcgcaaggaccgtgggcgtattctgcggcgtgac
aaacggcgcaccggcaccggggaccgagacaaggcctccaagaacctggagccccggacc
gggccggctcaggacgggaggaaacgcagcagcagcgcttgtgcaggaggaaaatccctg
gtgacgagcatgcctccggaccaggtgctcctcctgctccagtgcgccgagccccccatc
ctgtgctctcggcagaagctgagccgaccctacaccgaggtcaccatgatgaccctgctc
accagcatggccgataaggagctcgtccacatgatcacctgggccaagaagcttccaggt
ttcctgcagctgggcctccacgaccaggtgcagctgctggagagctcctggctggaggtg
ctgatgatcgggctcatctggaggtccatccactgccccgggaaacttatctttgcccag
gacctaatactagacaggaacgaaggcgactgcgtcgaaggcatggcggagatcttcgac
atgctgttggccactgcttcccgcttccgcctgctcaaactgaaacctgaggagtttgtt
tgtctcaaagcgatcatcttgcttaactctggcgccttctcgttctgcacaggcacgatg
gagcccctccacgacaccgcggccgttcagcacatgctggacaccatcacagacacgctc
atacatcacatcagccaatcggggggcccggttcagcagcagtcgagacggcaggcccag
ctgctcctcctgctctcccacatccgacacatgagcaacaaaggcatggagcatctctac
agcatgaagtgcaagaacaaagtgcctctgtacgacctgctgctggagatgctggacgcg
caccgcctccaccgcccggacaaaccaggtgagccgtggttcaacgccgacggagagcct
ctctccaccgccagcaacgacaacaacaacagcagcagcagcggcggcggcggcttttca
ggaggatccggttcaggaccccgagtcagcctggagagcccgagcagagcccccacagtc
ctgcagtacggagggtcccactctgattgcacccacatcctatga
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