Pseudoliparis swirei (Mariana hadal snailfish): 130203677
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Entry
130203677 CDS
T09868
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130203677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130203677
03036 Chromosome and associated proteins [BR:
pswi03036
]
130203677
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
130203677
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130203677
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
130203677
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130203677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
zf-C2H2_jaz
SET
zf-C2HE
zf-C2H2_11
zf-met
Zn-ribbon_8
Zap1_zf1
zf-C2H2_6
zf_UBZ
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
130203677
NCBI-ProteinID:
XP_056286012
LinkDB
All DBs
Position
13:9174238..9178185
Genome browser
AA seq
934 aa
AA seq
DB search
MSGKSTGVEWVETTEEVVMTEECLNNTPAVMPVLEGTETPIQKLLDTVGHGDNPEADGGF
YCEECLTLFQVPSDPANITVGPSFILDFPTSTGLPQRALLTLPYGLMVGRSSVPNVGVGV
INHGPTVSPGMHFGPYEGDVTTREDAMASDFSWEIYKEKDEYEYIDAARESHSNWMRYVN
CARNKDETNLLAVQYKGSILFHCCRAIHPGDELMVWPSDKFLAQFSEAWRQVWVMKLNAT
ESNSTATSQIFPCSHCQLSFTTESFLQRHTEHFHMQPAGGSATPAAEASQAEDPSSDSAL
PAASLVAFSVDPVESKTCGDCGKTFKQIPHLRRHKLCVHSNKRPYCCPQCRRCFTQASGL
IRHQLVHRKHAGMNDADLVPDPDLCETTESWTLRSELFSAADPAIAEEAKDANESENAQE
AMDVTETESTPAGEAEASRFSCSDCDGSFTNEANLRKHKATVHERLRPYVCTVCQKCFGQ
CNDLTRHLQHHQKQSKRGKKAKEAPEEPATMPFSCAECSQTFASVDALQQHITERHAEEE
EEEAPEAPVETQEYDRSRDPDFSPQTSAAETVELVPKRQRPQRLCAGSRISAITKLIAPK
RRAAARKKPPADPDGKRPKRKRFSCNRCKRTYGNPDDLKAHKCPAKQLKCAQCGATFSKS
GFLKRHEQVAHEDATSYSCDRCGKVFSTTGNLKQHQKSKTCMRYHCTSELFPCSFCQFSF
TMESYLIKHVKRHHPVEYLSHCDSNGLADQLEEEEEEDGEEKEEEDGKTYVCPHCGKSYA
SGKAFKSHTCFRQVKVLYLCTDCGKGFSNHYSLKQHQRVHTGEKPYTCPHCGKSFSYTGQ
LNVHLRTHTGEKPYLCTHCGDSFRQSGDLKRHERKHTGVRPHSCAECCKSFSRPQSLKAH
QMLHLGQRMFKCTQCGKSFSRSYHLRRHHQKMHL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcaagagcaccggggtggagtgggtcgagaccaccgaggaggtcgtgatgact
gaggagtgcttaaacaacactcctgcagtgatgccggttttggagggaacagaaacgcca
atccagaagttgctggacaccgtgggacatggagataacccggaggctgacggtggcttc
tattgtgaggagtgtctgactctcttccaggtgccgagcgatcccgccaacatcaccgtt
ggcccgtctttcatcctcgacttcccaacgagcacggggctcccccagagggccctcctc
acgctgccctacggcctgatggtaggcaggtcgagcgttcccaacgtgggcgttggggtc
ataaaccacgggccgacggtgtccccgggaatgcattttggaccgtacgagggggacgtg
acgacgagggaagacgccatggcaagcgacttctcctgggagatttacaaagaaaaagat
gaatatgagtacattgatgcagccagagaatcgcactcaaactggatgaggtacgtcaac
tgtgctcgtaacaaagacgagacaaacctcctggcggttcagtacaaaggcagcatcctc
tttcattgctgtcgcgccatacaccctggagacgagctcatggtgtggcccagcgacaaa
tttctggcccagttcagtgaagcttggaggcaggtgtgggtgatgaagttgaatgcaaca
gagagtaactccactgcaacatctcagatcttcccgtgctcccactgccagctgtccttc
accacagagtccttcctccagcggcacacagaacacttccacatgcagcctgcagggggc
agcgcgacaccggctgctgaggcgtctcaagccgaagatccctcttccgactcggctctc
cctgcggcctccctggtggcgttttctgtggaccccgtcgagtccaagacgtgtggcgat
tgcgggaagacattcaagcaaatacctcacctcaggcggcacaagctctgcgtccactcg
aacaaacggccctactgctgcccgcagtgccggcggtgctttacccaggcgtccggcctc
atcagacaccagctggttcacaggaagcacgccgggatgaacgacgcagacctcgttccc
gatccggacctctgtgagacgacggagagctggacgttgagatccgaactcttcagcgct
gcagatccagccatcgccgaggaagcgaaggacgcgaatgaaagcgagaacgcacaagaa
gctatggatgtaaccgagacggagagcactcccgccggagaggcggaagcttcccgattc
agttgttcggactgcgacgggagcttcacgaacgaggccaatctgaggaagcacaaggcg
actgtccacgagaggttgcgcccgtacgtctgcaccgtgtgccagaagtgcttcggccag
tgcaacgacctgacccggcacctgcagcatcaccagaagcaaagcaagaggggcaagaag
gcgaaagaggctccggaggaacctgccaccatgcccttcagctgtgccgagtgttcacag
acgttcgcctcggtggacgccctccagcagcacataacggagcgccacgccgaggaggag
gaggaggaggcgccggaggcccccgtggaaacccaagagtacgatcggagccgcgatcca
gacttcagcccgcaaacgtcagcggctgaaacggtcgagttagtcccaaaacgtcagagg
cctcagagactctgcgccggatcaagaatttcggccataaccaagctcatcgccccaaaa
cgaagggcggccgcccgcaagaagccgccggccgaccccgacggaaagcggccgaaacgc
aaacggttcagctgcaaccgctgcaagcggacgtacgggaacccggacgacctcaaggcg
cacaagtgcccggcgaagcagctcaagtgcgctcagtgcggggcgaccttcagcaagtcc
ggcttcctgaagagacacgagcaggtggcgcacgaggacgccacgtcgtacagctgcgac
cgctgcggcaaagtcttctccacgaccggcaacctcaagcagcaccagaagagcaagacg
tgcatgaggtaccactgcacgtcggagctcttcccgtgctccttctgccagttctccttc
accatggagagctaccttataaaacacgtcaagaggcaccacccggtggagtatctgtct
cactgcgactccaacggcctcgcggatcagctggaggaggaggaggaggaagacggggaa
gagaaagaggaggaggacgggaaaacgtacgtgtgcccacattgcgggaagagctacgcc
agcggcaaagcgttcaaatcccacacgtgcttccggcaggtgaaggtgctgtacctgtgc
accgactgcgggaagggcttcagcaaccactacagcctcaagcagcaccagcgggtgcac
acaggcgagaagccgtacacctgcccccactgcggcaagagcttctcgtacacgggccag
ctcaacgtgcacctcaggactcacaccggggagaagccgtacctgtgcacgcactgcggc
gacagcttccggcagtcgggggacctgaagcggcacgagaggaagcacacgggcgtgagg
ccccacagctgcgccgagtgctgcaagagcttcagccgcccgcagagcctcaaggcccac
cagatgctgcacctggggcagcggatgttcaagtgcacgcagtgcggcaagagcttctcc
cgcagctatcacctcaggaggcaccaccagaagatgcacttgtag
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