Pseudoliparis swirei (Mariana hadal snailfish): 130206713
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Entry
130206713 CDS
T09868
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130206713 (trdmt1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
130206713 (trdmt1)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130206713 (trdmt1)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
130206713
NCBI-ProteinID:
XP_056290783
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Position
16:24404932..24420636
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AA seq
378 aa
AA seq
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MEPLRVLELYSGIGGMHYALKGSGIPATVVAAVDINTTANQIYKHNFPDTPLWNKTIEGI
TLDVFNKLPFDMILMSPPCQPFTRIGLKGDIADPRTKSFLYILDLLPRLSRPPRFILLEN
VKGFESSSARDCLVKTLTECGYTFQEVMVSPTSVGIPNSRLRYFLIAKLSAENQSTQRSK
TPDAFTPPAERESPEQLTDSGPLRPEEDVEGSRVLYKQETTKDAQRKTSQNNDLSVRRIR
DFLEPAVDEEHFLLPPRTLLRYALLLDIVQPSCRRSVCFTKGYGRYVEGTGSVLQSCEGT
EMEAVFRGLDSLCEEEKLQKLSQLRLRYFSPREVANLMGFPQSFSFPEQTSTRQQFRALG
NSLNVEVVVRLLHRLLSL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagcctctgcgggtgctcgagctctacagcgggataggaggcatgcattacgccttg
aagggaagtgggattcctgccacggtggtggcggccgtcgacatcaacacgacggccaat
cagatctacaagcacaatttccccgatacccccctctggaacaagaccattgagggcata
acactcgacgtgttcaacaagttaccgtttgacatgatcctgatgagcccgccctgtcag
ccgttcaccaggataggacttaagggcgacatcgctgaccccagaaccaagagtttcctc
tacatcctagacctcctgccaaggttgagcaggccgcctcgcttcatcctgctggagaac
gtgaagggcttcgagagctcctcggccagggactgcttggtgaagactctcacggagtgc
ggatacactttccaggaggtcatggtctcacccacaagtgtcgggatcccaaattccagg
ctgcgttatttcctgattgcgaagctttcagcagaaaaccaaagcacccagaggtcaaag
acgccggacgccttcacacctccggctgagagagaatctcctgagcagctcacggactcc
ggtcctctccgcccagaagaggacgtggaggggtctcgggtcctctataaacaagagacc
acaaaggatgcccagaggaagacgagtcagaacaacgacctgtcagtcaggcggatcaga
gacttcctggaaccggcagtagatgaggagcacttcctccttcctcccaggacgctgctg
cgctacgctctgctgctggacatcgttcagccctcatgccggaggtccgtgtgcttcacc
aaaggctacggccgctacgtggagggaaccggctcggtgctgcagagctgcgagggaacc
gagatggaggccgtgttcaggggtctggactcgctgtgtgaggaggagaaactccagaag
ctgtcgcagctccggcttcggtacttcagcccccgagaggtggccaacctcatgggcttc
ccccaaagcttctccttcccggagcagacgtccaccaggcagcagttcagagcgctgggg
aacagcctgaacgtggaggtggtggtcagactgctgcacaggctgctgtccctctga
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