Pseudoliparis swirei (Mariana hadal snailfish): 130211670
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Entry
130211670 CDS
T09868
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00780
Biotin metabolism
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
130211670 (hlcs)
Enzymes [BR:
pswi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
130211670 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
130211670 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
130211670 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
130211670 (hlcs)
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
130211670
NCBI-ProteinID:
XP_056298565
LinkDB
All DBs
Position
3:16053223..16093946
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AA seq
914 aa
AA seq
DB search
MLITLCYVYLWVRFHKCYSVLIRNSLSRLSSGSFSFAVCSSSASAPAAASSAARQPPGPL
PAEEDAVFLQLGDRAVYVTKPQACDDLSKWTVLLGSSLVCSPCIENISFIIEAAGHTVGY
RSPRTSNKKVLKWSDYCLPLARSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDNGLKPS
KIIPVLLQESTLSELLEKQCPNTKTPPCLCGAEPLLRDLPADRQHPPCSKGSLLLPPEVK
RRLEERRGSEPLHGTKDPHPVCDSEDRSLGNHHHMEGHRLHLSNCHECLELENSTILSVK
YASADNIPDLPDDDSAELDSGDETLDDVEHHAKGFSGQSGGPYCHSKPPNILLYTGGSQE
RFQFVRQILSECINMEDNIIYPLQPQQALSDPWLDNAKLLVLAEEEPLTPLLQTRFLTYL
SQGGRVLGLASTLCPAGLCLEAREERRGRVSRLSFTRQDSTELELSVLSSGKVYVRDKQG
GGEVELWGELKGDAPHQRDMVVVRVTHGEDGGEAVLCQAHLEIAPDPQNLTAKGFDELKV
SNALRYEVLTEILTSLGLSCELNETPAPSPVHLLATSQEAKTTCVDWLRTRADPNGLISL
SKASLLLVSSSELQDSPSLPGSSLALVTDSSESQSSPQFSMETYRENLKTSLLGHTVLYA
EVATSTMDLLQGLSLHLPKDVGLMAVADRQSQGRGRGGNAWLSPLGCAMFTLAVQVELSS
KLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYSNLMKLGGVVVTSTLIGS
TFHLLIGCGFNVTNSNPTVCINDLIQQHNAGHSGSLQPLRCDQLIARTAGCLEALIGSFQ
RGGADAVLPTYYKRWLHSGTRVHLWSEDGLEAEVVGLDANGFLQVHNKEQGVVSLEPDGN
SFDMLKNLVVLKQH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacgctgtgctacgtctatctgtgggtgcgctttcacaagtgctactcggtg
ttgatacgaaacagcctgtcacgactgagcagcggcagcttcagcttcgcagtttgctcc
agctcggcctcggcaccagccgcagcgtcgtcggccgcgcgccagccgcccggtccactt
cctgccgaggaggacgccgtcttcctccagctgggagacagggccgtctatgtcacgaag
cctcaggcgtgcgacgacctcagcaaatggaccgtgctgttggggtcttctctggtttgc
agtccgtgcatagagaacatttcattcatcatagaggctgcgggacacacagtgggctac
cgctctcctcgcacgtccaataagaaagtgctgaagtggtctgattactgcctccctctg
gcccgtagccccggtcagcccttcagggcggtggctcaggccagcgtggacaacttcagt
cggctgggggtggcttttatcgaggatcgccttcagctggacaatggactgaagccgtca
aagataatccccgtcctcctccaagaatccaccctcagcgagctgctggagaagcagtgt
ccaaacacaaagacgccaccatgtctctgcggcgctgagcctttactccgtgacctgccg
gccgaccgccagcacccgccgtgcagcaaaggcagcctgctcctcccgccggaggtcaag
aggaggttggaggagcggagagggtcggagccgctccacggcaccaaggacccgcatcct
gtttgcgactcggaggaccgctccttgggcaaccatcaccacatggagggccacagactc
cacctgtccaactgccacgagtgcttggagctggagaacagcaccatcctctcagtcaag
tacgcgtcggccgacaacattccggaccttccagatgatgactcggcagagctggacagt
ggggatgagactctggatgacgtcgagcaccacgccaaagggttttccgggcagagcggt
ggaccttactgtcatagcaagccgccaaacattctgctgtacacgggcggcagccaggag
cgttttcagttcgtccggcagattttatcagagtgtataaatatggaggacaacataata
tatcccctccaaccacagcaggctctgagcgacccgtggctggacaacgccaagctcctc
gtcctggcagaggaggaacccctgacccccctgcttcagacccgttttctcacctacctg
agccagggtggcagggttctggggctggcctccaccctgtgcccggcaggcctctgcctg
gaggcccgggaggagcgccgaggccgggtcagcaggctgagcttcaccaggcaggacagc
acggagctggagctgagcgtgctgtcgagcgggaaggtctacgtcagggacaagcaggga
ggaggggaagtggagctctggggggagctgaagggggacgcccctcaccagagggacatg
gttgtagtcagggtgacccacggagaggacggcggggaggctgtcctctgtcaggcccac
ctggaaattgctcccgacccccagaatttgacggccaaaggctttgatgaactgaaagtc
agcaacgcgctgcgttatgaagtcttgacggagatcctcacctctctgggcctcagctgc
gagctgaacgagaccccggccccgagcccagtccacctgctggccacctctcaggaggcc
aagaccacctgcgtggattggctgcggacgcgtgccgatccaaatggtctcatctcactg
tccaaggcctcgctcttgctcgtgtcgagttctgagctccaggatagcccctcgctcccc
ggcagctccttggccctggtcaccgactcctcggagtcccagagctcgccacagttcagc
atggagacgtacagagagaacctgaagaccagcctgctggggcacaccgtgctgtacgcc
gaggtcgccacgtccaccatggacctgctgcaagggctgagtctgcacctaccaaaggac
gtgggcctgatggcggtcgctgatcgacaaagccagggcagaggtcggggcgggaatgcc
tggctgagccctctgggctgcgccatgttcactctggcggtccaggtggagctgagctcc
aagctcggacagaggatccccttcctgcagcatctggccgccctggcggtggtggaggcc
gtccgcactcttcctggataccaggacatagacttgagggtgaagtggcccaatgacatc
tattatagtaacctgatgaagctcgggggagtagtggtgacttccactctgataggatcc
acctttcacctgctcataggctgtggcttcaacgtgaccaacagcaacccgacggtgtgc
atcaacgacctgatccagcagcacaacgcggggcacagcggcagcctgcagccgctccgc
tgcgaccagctcatcgcccgcacggccggctgcctggaggccctcatcggcagcttccag
cgggggggcgccgacgccgtcctgcccacctactacaagaggtggctgcacagcgggacc
cgggtgcatctctggagcgaggacggactggaggccgaggtggtgggcctggacgccaac
ggcttcctccaggtgcacaacaaggagcagggcgtggtctccctggagcccgacgggaac
tccttcgacatgctgaagaacctggtggtcttaaagcagcactag
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