Pseudoliparis swirei (Mariana hadal snailfish): 130213091
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Entry
130213091 CDS
T09868
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04814
Motor proteins
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130213091
04820 Cytoskeleton in muscle cells
130213091
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130213091
04261 Adrenergic signaling in cardiomyocytes
130213091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130213091
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
130213091
BRITE hierarchy
Motif
Pfam:
Tropomyosin
TMF_DNA_bd
DUF3450
CALCOCO1
Laminin_II
DUF1664
Fib_alpha
MscS_porin
Crescentin
ERM_helical
Sec10_N
TPR_MLP1_2
DUF745
Motif
Other DBs
NCBI-GeneID:
130213091
NCBI-ProteinID:
XP_056300497
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All DBs
Position
22:complement(656090..671352)
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AA seq
249 aa
AA seq
DB search
MSGGLNSIDAVKKKIKVLQEQAEEAEDRAVLLQKEVEKEKMAREEAEAEVTSLGRRLQLS
EDNVERVQERLCSTLSKLEEVEKSSDESERGMKVIENRALKDEERMETLEVQLREAKLIA
EEADRKYEEVARKLVMVEGELERAEDRAEQGESKSRGLEDELKTVFTSSKSLEAQTEKYS
HKEDRYEEEIKNLSNKLKEAESRAEAAERSVAKLEKTVDGLEDALTSARNANMELQTTLN
QTMEELNSC
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggactgaacagcatcgatgccgtgaagaagaagatcaaagtgctgcaggag
caggcggaggaggccgaggaccgagctgtgctcctgcagaaggaggtggagaaggagaag
atggccagagaggaggcggaggccgaggtgacgtctctgggccgccggctgcagctcagt
gaggacaacgtggagcgagtccaggagagactctgctccaccctgagcaagctggaggag
gtggagaagagctctgatgagagcgagagaggcatgaaggtcatcgagaacagggccctg
aaggacgaggagcggatggagacgctggaggttcagctgagagaagccaagctgatcgct
gaggaggccgaccgcaagtatgaggaggtggcccgtaagctggtgatggttgaaggtgaa
ctggaacgagctgaagacagagcagagcagggagagagtaagagtcgagggttggaggac
gagctgaaaactgtcttcactagttcaaagtctctggaggcccagacggagaagtactcc
cataaagaagaccggtatgaggaggagatcaagaacctgagcaacaagctcaaggaggct
gagagcagagctgaagctgcagagcgctccgtggccaaactggagaagaccgtcgacggg
ctggaagacgctttgacttcggccagaaacgccaacatggagcttcagacgactctgaat
caaactatggaggagctcaactcctgctga
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integrated database retrieval system