Psychrobacter sp. DAB_AL43B: DABAL43B_0481
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Entry
DABAL43B_0481 CDS
T04748
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psyc
Psychrobacter sp. DAB_AL43B
Pathway
psyc03030
DNA replication
psyc03410
Base excision repair
psyc03420
Nucleotide excision repair
psyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DABAL43B_0481 (polA)
03410 Base excision repair
DABAL43B_0481 (polA)
03420 Nucleotide excision repair
DABAL43B_0481 (polA)
03440 Homologous recombination
DABAL43B_0481 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psyc03032
]
DABAL43B_0481 (polA)
03400 DNA repair and recombination proteins [BR:
psyc03400
]
DABAL43B_0481 (polA)
Enzymes [BR:
psyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DABAL43B_0481 (polA)
DNA replication proteins [BR:
psyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DABAL43B_0481 (polA)
DNA repair and recombination proteins [BR:
psyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DABAL43B_0481 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DABAL43B_0481 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
SLJ83695
UniProt:
A0A1U6GJK5
LinkDB
All DBs
Position
I:complement(563464..566454)
Genome browser
AA seq
996 aa
AA seq
DB search
MTDHMTDPSSDNNHNSHQALDPKALPNFDTMPNVATMDTSHVDKDQPPFILVDGSYYLFR
TYHALPKTMQNSQGLITNAIRGTLNALLKLMRRYHPTHMAVCFDTKSPTFRHHMSADYKA
ARPPIDIELLEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAHRAVEQGHHVVISTGDK
DMMQLVNDCVILEDSFTGKVTDTAAVIEKFGINPNQMIDFLTLMGDASDGIKGVPGIGKK
TAKDLLVEYGDIANMLKHIGFIKGRGAKGLIEHADDIPFNAKLATIVTDLDIGQDWNDLK
INTDPCAHIDELRELYNELEFRNELASLDHPNHPANANGHGSQSVADSQADAESQAQIAK
YLQSTKIDDIKDSKSHDKAWHTILDEPAFDSLIQLLEAAPHFVIDTETTSVYWREAQIVG
LSFAVQAHEAYYVPLTHSLEDDELTAKQLDRDTVLARLKPILENPNIGKIGQHLKYDAHI
LSHYDIDLVGAIHERPNNWAMDTMLASYVINAAITRHGMDDLARHYLQTQTISFEDVAGK
GAKQVSFDKVAIDIASDYACEDADITYQLFDIFSEKLADDENNSKLLHELEIPTAEILCQ
MEAHGILIKRSFLNELSKRFDEEIIALEKRAYEVAGEEFNLGSPKQLGEMLFEKLGVAGG
KKTKSGQYSTGEAVLSKIDHPLVDITLEYRSLSKLKSTYTDALDNVADAETDRVHTSYHQ
ALTSTGRLSSTDPNLQNIPIRTATGRLIRQAFIAPAGRVILAADYSQIELRLMAHFSGDE
NLTHAFNEGLDIHAATAAEVLGKDVADVSSTERRNAKAINFGLLYGMSAFGLAKQLQMSR
GEAQDYIDMYFERYPGVKNYMVNTRASAYEQGYVETILGRKLYTPDINHSNRMVKQGAER
AAINAPLQGSAADLIKLAMIAVDKVLPKSQAKMLLQVHDELVFEVDADKVDDISQLITNA
MQDVLTTTAVGKGWNVEFAVPLLVETDSGQNWDEAH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccacatgaccgaccctagctcagacaataaccacaactcccaccaagcactc
gatcctaaagcgttgcctaacttcgataccatgccaaatgttgcaaccatggacaccagt
cacgtcgacaaagaccagccaccttttattttagttgatggctcttattatctgtttcgt
acttatcatgcgctgccaaaaaccatgcaaaattcgcaaggactgataaccaacgccatc
cgcggcacgcttaatgcgctgctaaagctgatgcgccgttatcatccgactcatatggcg
gtttgctttgataccaagtcaccgacttttcgccatcatatgtctgcggattataaagct
gcccgtccacccatcgatatagagctattagagcaaattccttatatccatcgtttggtg
accgcgttgggtattccactgttacgcattgaaggggcggaagccgatgatatcatcggt
acgcttgctcaccgtgcggtcgagcaaggtcatcacgtggtcatctcaaccggcgataaa
gatatgatgcaactggtcaatgattgcgtcatattagaggatagctttacaggcaaagta
accgacaccgcagcggtcattgaaaaatttggtattaaccccaaccaaatgattgatttt
ttaaccttgatgggtgacgcctctgacggtatcaaaggcgtgcccggtattggtaaaaaa
acggcgaaagacttgctcgtagaatatggtgatatcgctaatatgttaaagcatattggc
tttattaaaggtcgcggtgcaaagggtttgattgagcacgccgatgatatcccgttcaat
gccaaactggcgaccatcgtgacggacttagatatcggtcaagattggaacgatttaaaa
atcaataccgacccttgtgcccatatagatgaattacgtgagttatataatgagcttgag
tttagaaatgagctggcttctctcgaccacccgaaccatcccgccaacgctaatgggcat
ggctcgcaaagtgtcgctgacagtcaagccgatgccgaatcacaagcgcaaatcgctaaa
tatctacaatcgaccaagattgatgatatcaaagacagtaaaagccatgataaagcctgg
cataccattttagatgagcctgcatttgacagtttgattcagttattagaagccgctcca
cactttgtcattgacactgaaaccaccagcgtttattggcgcgaggcacaaatcgtcggt
ctatcgtttgcggtgcaagcacatgaggcttattatgtgccgctcacgcacagcttagaa
gacgatgaactaacggcaaagcaacttgatcgcgatacagtattagcacgtctcaaacca
attttagaaaatccaaatatcggcaaaatcggtcaacacttaaagtacgatgcgcatatt
ctcagtcactatgatatcgacttagttggcgcgatacatgagcgtcctaataattgggca
atggataccatgcttgccagctacgtcatcaatgccgcgattacccgtcatggcatggac
gacttggctcggcattatctacaaacacaaaccatcagctttgaagatgtggctggcaaa
ggtgctaagcaagtcagttttgataaagtggctattgatatagccagtgattatgcttgc
gaagatgccgatatcacttatcagctgttcgatattttcagcgagaaacttgccgatgat
gaaaataattctaagctgctgcacgagctagaaatcccaacggctgaaatactttgccag
atggaagctcacggtatcttaatcaaacgttcatttttaaatgagctgtctaaacgtttt
gatgaagaaattatcgctttagaaaaacgcgcgtatgaagttgctggcgaggaatttaat
ctaggttctcctaagcaacttggcgagatgctatttgaaaaactaggcgttgctggtggc
aaaaaaactaagtcaggtcagtattcgactggcgaagcggtattgtcaaaaatcgatcac
ccgttggttgatatcactctagaatatcgtagcctatctaagcttaaaagcacctatacc
gatgcgttagataacgttgcagatgctgagactgaccgcgtacatactagctatcatcaa
gcgctgaccagtactgggcgtttatcttcaaccgatcccaatttacaaaatattccgatc
cgaaccgctactgggcgtctgattcgccaagcctttattgcgccagcaggtcgcgttatt
ttagcagcggattactcgcaaattgagctgcgtttgatggcgcatttctcaggcgatgaa
aatctcactcatgcatttaatgaagggttggatattcacgcagccactgctgctgaagtg
ttagggaaagatgttgctgatgttagctcaactgagcgtcgtaatgctaaagccattaac
tttggtctgctatacggtatgagcgcctttgggcttgctaagcagctgcaaatgagccgc
ggcgaagcgcaagactatatcgatatgtactttgagcgttatccgggtgtgaaaaactat
atggtcaatactcgtgccagcgcttatgagcaaggctatgtcgagaccatattgggtcgt
aagctttacacccctgatatcaaccacagcaatcgtatggtcaagcagggtgctgaacgg
gcggcgattaatgcgccattacaaggctcagcggctgacttgattaagctggcgatgatt
gctgtcgataaagtattaccaaaatctcaggcaaaaatgctactacaagtccatgatgaa
ttggtatttgaagtcgatgcagataaggttgatgatattagccaattaattactaatgcg
atgcaagatgtcttgacgacgacagccgtcggaaaaggctggaatgtagaatttgctgta
ccactattagtcgaaacagatagtggacaaaactgggacgaggcgcattaa
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