Psychroflexus sp. ALD_RP9: IMZ30_08410
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Entry
IMZ30_08410 CDS
T09874
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psyd
Psychroflexus sp. ALD_RP9
Brite
KEGG Orthology (KO) [BR:
psyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyd03009
]
IMZ30_08410 (rimO)
Enzymes [BR:
psyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IMZ30_08410 (rimO)
Ribosome biogenesis [BR:
psyd03009
]
Prokaryotic type
ribosomal protein modification factors
IMZ30_08410 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
DUF3860
TRAM
Motif
Other DBs
NCBI-ProteinID:
QSS96468
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Position
1812510..1813814
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AA seq
434 aa
AA seq
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MRTKTLKKHKINVVTLGCSKNIYDSEVLMGQLKANQKDVVHEQEGDVVVINTCGFIDNAK
EQSVNTILDFVERKEAGEVEKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPALLKALG
ADYKHELIGERLTTTPKNYAFLKIAEGCDRPCSFCAIPLMRGGHKSKPIEELVEEATKLA
SNGVKELILIAQDLTYYGLDLYKKRNLAELLQQLVKVEGIEWIRLHYAFPTGFPLDVLDV
IKNEPKICNYIDIPLQHISDHLLKSMRRGTTHEKTTNLLRKFRQIVPEMAIRTTLIVGYP
GETEADFEELKQWVKDMRFERLGCFTYSHEENTHAYSLEDDVPDEVKMQRANEIMEIQSQ
ISWELNQEKIGQVFKCVFDRKEGNYFVGRTEFDSPDVDNEVRVDARKYYLKLGDFAHIKI
TQAEDFDLYGEPTS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaaacccttaaaaagcacaaaattaatgtggtcactttaggatgtagtaaa
aatatttatgattctgaagtattaatggggcaactcaaagccaatcaaaaagatgttgtt
catgagcaagaaggtgatgtagtcgtgattaacacatgtggctttatcgataatgctaaa
gagcaatcggtaaatacgattcttgattttgttgagcgtaaagaagctggagaagtcgaa
aaagtttttgtgacaggttgtttgtcagaacgctataagccagatctccaaaaagaaatt
cccgatgtagatcaatattttggaactactgaacttcctgccttattaaaagctttaggc
gcagattataaacatgaattgattggtgaacgcctaaccacaacaccaaaaaactacgcc
tttttaaaaattgctgaaggatgtgatcggccatgctctttttgcgcaataccactaatg
cgcggcggacacaaatctaaaccaattgaagaattagttgaagaagccactaagctagct
tcaaacggtgttaaagaattaattttaatcgctcaagatttaacctattatggtttagat
ttatataaaaaaagaaacctagcagaactactgcagcaacttgtaaaagttgaaggtata
gagtggataaggcttcattatgcttttcctactggatttcctttagatgtgctcgatgtg
attaaaaatgagcctaaaatttgtaactatatagatatcccgctacaacatatttccgat
caccttttaaagtctatgagacgtggtacaactcatgaaaagacaactaatttacttcgt
aaatttagacaaattgtccctgaaatggcgattagaactacgttaattgttggttatcct
ggcgaaactgaagctgattttgaagaattaaagcaatgggttaaagacatgcgcttcgag
cgtttaggctgctttacctattctcatgaagaaaacacgcatgcttatagtcttgaagat
gatgtgcctgatgaagttaaaatgcaacgcgctaacgaaatcatggaaatacaatctcaa
atttcatgggaactcaatcaagaaaaaataggacaagtatttaaatgtgttttcgaccgt
aaagaaggtaattattttgtaggacgaaccgaatttgattcgccagatgtagataatgaa
gttcgagtagatgctcgaaaatattatcttaaattgggtgattttgctcacattaaaatc
actcaagctgaagattttgacctctacggtgagccaacctcataa
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