Psychroserpens sp. NJDZ02: E9099_01720
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Entry
E9099_01720 CDS
T05945
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psyn
Psychroserpens sp. NJDZ02
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyn03009
]
E9099_01720 (rimO)
Enzymes [BR:
psyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E9099_01720 (rimO)
Ribosome biogenesis [BR:
psyn03009
]
Prokaryotic type
ribosomal protein modification factors
E9099_01720 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QCE40192
UniProt:
A0A4P7WU22
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All DBs
Position
complement(355996..357300)
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AA seq
434 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLKANGKEVVHEEEGNVVVINTCGFINNAK
EESVNTILEYMQKKEDGEVDKVFVTGCLSERYKPELQKDIPNVDQYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPIMRGKHKSTPIENLVIEAEKLA
ANGVKELILIAQDLTYYGLDIYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLDL
MKREPKICNYLDIPLQHISDDLLKSMRRGTTKAKTTKLIEEFRAIVPEMTIRTTLIVGYP
GETEAHFQELKQWVKDMRFERLGCFTYSHEENTHAYKLEDDVPQEVKQDRANQIMEIQSQ
ISWELNQEKIGETFNVVIDRKEGTYFVGRTEFDSPDVDNEVLIDATETYLKTGEYYNIKV
TEAEDFDLYGELVK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagtcacttaaaaagaacaaaatcaacgtaataactttaggttgtagtaaa
aacgtttacgatagcgaagtcctaatgggacaattaaaggctaacggaaaagaagttgtg
catgaagaggaaggtaatgtcgttgtgattaatacgtgtggttttatcaataatgccaag
gaggaaagcgtgaacactattttagagtacatgcaaaaaaaggaagatggagaggttgat
aaagtatttgtaactggttgtttaagtgaacgatataagccagaattacaaaaggatatc
cctaatgttgatcagtattttggaactacagaattacctggactacttaaagctttaggt
gcagattataaacatgagttaattggagagcgtctaacaacaacgccaaaaaattatgcg
tatttaaagatcgcagaaggttgtgatagaccttgtagtttttgtgcaattcctataatg
agaggaaaacacaaatcgacaccaatcgaaaatttagttattgaagctgaaaaattagca
gccaatggtgttaaagaattgatcttaattgctcaagatttaacatactacggtttagat
atttataaaaaacgtaaccttgcagagttacttgaaaacttagtaaaagttgaaggtata
gagtggataagattacattatgcatttccaacaggtttcccgatggatgttttagattta
atgaaacgcgaacctaaaatttgtaattatctagatattccattacaacatattagtgac
gatttattaaaaagtatgcgtcgtggtactacaaaggcaaaaacaactaagctaatagaa
gagtttagagctatagttccagaaatgactatcagaacgacattaattgttgggtatcca
ggtgaaacggaagcacattttcaagagttaaaacaatgggttaaagacatgcgttttgag
cgtttaggatgctttacgtattctcatgaagaaaacacacatgcttataaattagaggat
gatgtgccacaagaggtgaagcaagatagagcgaaccaaattatggaaattcaatctcaa
atttcttgggaattaaatcaagaaaaaattggagagacctttaatgtcgttatcgatcgt
aaagaaggcacatattttgttggtcgtacggaatttgatagtccagatgtagataacgaa
gtgttaattgatgctaccgagacgtatttaaaaactggagagtattataatattaaagtt
acagaagctgaagactttgacttgtacggagaattagttaagtaa
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