Psychrobacter sp. PAMC27889: E5677_09390
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Entry
E5677_09390 CDS
T06076
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psyp
Psychrobacter sp. PAMC27889
Brite
KEGG Orthology (KO) [BR:
psyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psyp03009
]
E5677_09390 (rimO)
Enzymes [BR:
psyp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E5677_09390 (rimO)
Ribosome biogenesis [BR:
psyp03009
]
Prokaryotic type
ribosomal protein modification factors
E5677_09390 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCB31192
LinkDB
All DBs
Position
complement(2290727..2292313)
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AA seq
528 aa
AA seq
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MSKTSTESVNTTTITSPSASTAPNNTATIFNPAKPAMAKERGLSDSSQPYHHKANHNQNR
SIVQSSDAASTAATSTAPVSAAPKIGFVSLGCPKALVDSERIITELSRDGYQVASDYDGA
DLVVVNTCGFIESAVQESLDAIGEAISKNGKVIVTGCLGKEAEKIREMHPAVLAVTGAHA
YDEVITAVAQHVPRPNRNMDTNYDPKIDLINEAGIKLTPSHYAYLKISEGCNHRCTFCII
PSLRGDLVSRPIDNVMNEAMALKKAGVKELLIISQDTSAYGLDLKYKTSFWNGMPLKSKF
YDLCQALNDLGIWVRLHYVYPYPHVDKVVELMGEKKLLPYLDIPFQHASHSILKAMKRPA
HSENTLARIKAWREICPDIVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEV
EGAVANDLPNHVPEDVKQSRYERLMALQQEISAQKLQEKVGKTLMVLVDEIDSDENIAIC
RSYADAPEIDGHVYVDEITDQVKVGQFLTVTIDDASEYDLFASYQGEH
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaacttctaccgagtcggtaaatacgactacgatcacctcaccgtcagcgtct
actgctcctaataatacagccactatatttaatcctgctaagcccgcaatggcaaaagag
cgaggattgtcagacagtagccagccttaccaccataaagccaatcacaatcaaaaccgt
agtatcgtgcaaagcagtgatgctgcttcaacggcagcaacttctactgcgccagtgagc
gcagcaccaaagattgggtttgtatcgctaggttgcccaaaggcactagtagacagtgag
cgcattattacggaacttagccgtgatggttaccaagtcgcaagcgactatgacggtgca
gatttagtcgtggtcaatacttgtggctttatcgagtcagcagtacaagagtcacttgac
gccattggtgaagccattagcaaaaacggtaaagtcatcgttacaggctgtcttggcaaa
gaagcggaaaaaatccgcgaaatgcatccagcggtgctcgctgtgacaggtgctcatgct
tatgatgaagtgattaccgcagtggcgcagcatgtgcctagacccaatcgtaatatggat
accaactacgatccaaaaatagatttgatcaatgaggcaggcataaagttgacgccaagt
cattacgcctacctaaaaatctctgaaggatgtaatcaccgttgtactttctgtatcatt
ccaagtttacgtggtgatttggtctcgcgtccgatcgacaatgtcatgaatgaggcgatg
gcactgaaaaaggcgggcgtgaaagaattgttgattatttcacaagatacctctgcctat
ggtctcgacttaaagtataagaccagcttttggaatggtatgcccctaaaatctaagttt
tatgacttgtgccaagcattaaacgacttagggatttgggtgcgcctgcattacgtctat
ccttatccccacgtagacaaagtcgtcgagctgatgggcgaaaaaaagctgttgccgtat
ttggatattcctttccagcatgcgagccacagtattctaaaagccatgaagcgccctgca
catagcgaaaacacgttggcacgcatcaaagcatggcgtgagatttgcccagatatcgtg
attcgttcaacctttgttgtcggcttccctggtgaaacagaagaagattttcagtgtttg
ctcgattggctagttgaagcgcgccttgatcgcgttggggcatttacgtattcggaagtt
gaaggcgcggtcgccaacgatttgccaaatcatgtacctgaggacgttaagcaatctcgt
tatgagcgcttaatggcactacagcaagagatatcggcacaaaagctacaagaaaaagtt
ggcaagaccttgatggtattggttgacgagattgatagcgacgaaaatatcgcgatttgt
cgcagttacgctgatgcgccagagattgatggccatgtctatgttgacgaaattaccgat
caggtaaaagtgggtcaattcttaacggtcactattgatgatgcaagcgaatatgactta
tttgccagttatcaaggtgaacactga
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