KEGG   Pseudomonas syringae CC1557: N018_03425
Entry
N018_03425        CDS       T03014                                 
Symbol
ribD
Name
(GenBank) diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psyr  Pseudomonas syringae CC1557
Pathway
psyr00740  Riboflavin metabolism
psyr01100  Metabolic pathways
psyr01110  Biosynthesis of secondary metabolites
psyr01240  Biosynthesis of cofactors
psyr02024  Quorum sensing
Module
psyr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psyr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    N018_03425 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    N018_03425 (ribD)
Enzymes [BR:psyr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     N018_03425 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     N018_03425 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam STAS
Other DBs
NCBI-ProteinID: AHG39344
UniProt: W0ML60
LinkDB
Position
708082..709227
AA seq 381 aa
MSAVLTEQAALDVHYMARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHA
EVHALRQAGELARGATAYVTLEPCSHQGRTPPCADALVDAGLVRVVAAMQDPNPEVSGRG
LLRLMNAGIGVQCGVLESEARALNKGFLKRMETGRPYIRVKLAMSLDGRTAMASGESQWI
TGPEARSAVQRLRAQSSVVLTGADTVLADNARLTVRPDELGLDAEMSALAASRPPLRVLI
DGRLRVPLDAPFFQAGSALVVTCAAASARGRYQEEGHEMLALADSAGHVDLRKLMGELAT
RGVNEVLVEAGPRLAGAFARLGLVDEFQIFIAGKFLGSSARPLLDLPLAQMSEALELNIV
EMRAVGKDWRVIALPVFAPGV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgagtgcagtgttgactgagcaggccgccctcgacgttcattacatggctcgcgcgctg
gaactggcgcgcaagggcctttactccacacaccccaatccgcgagtcggctgcgtcatc
gtgcgtgatggccagatcgtcggtgagggctggcatgcccgtgcaggcgagccgcatgcc
gaggtgcatgcgctgcgtcaggcgggtgagcttgcccggggcgcaacggcttacgtcacg
cttgagccgtgcagtcatcaggggcgtacgccgccctgtgccgatgccctggtggatgcc
gggctggtgcgagtcgttgccgcgatgcaggaccctaatcccgaagtctccggtcgcgga
ctgctacgcctgatgaatgctggcatcggtgttcaatgcggcgtgctggaaagcgaagca
cgggcgctgaacaaaggctttctcaagcgcatggaaaccggccggccttatataagggtc
aagctggccatgagcctggatggtcgaactgccatggccagcggtgaaagccaatggatc
actggcccggaagcccgctcggcggtgcaacgcctgcgcgcgcagtcaagtgtggtcctg
acgggtgctgacacggtgctggcagacaatgcacgcctgaccgtgcgccctgacgagctg
gggctggacgcagaaatgagtgccttggccgccagccgtccgccgttgcgcgtattgatt
gacgggcgcttgcgtgtgccgctggacgcgccgttctttcaggctggcagtgcgctggtc
gtgacctgtgccgctgcgtcagcgcggggtcgttatcaggaagaaggccacgagatgctc
gcgctggccgacagcgccggtcacgtagacctgcgcaagctgatgggcgagctcgcaacc
cgtggcgtcaacgaggtcctggtcgaggccggtccgcgcctggcgggtgcgtttgcgcgt
ctcgggctggtcgacgagtttcagattttcatcgcggggaagtttctcggctcatcggcc
cggccgctgcttgacctgccgctggcgcagatgagtgaagcgctggagctgaatatcgtg
gaaatgcgggccgtcggcaaagactggcgagtcattgctctccctgtcttcgcacccggc
gtataa

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