KEGG   Candidatus Prometheoarchaeum syntrophicum: DSAG12_01473
Entry
DSAG12_01473      CDS       T06555                                 
Symbol
rpoK
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
psyt  Candidatus Prometheoarchaeum syntrophicum
Pathway
psyt03020  RNA polymerase
psyt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psyt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DSAG12_01473 (rpoK)
  09124 Replication and repair
   03420 Nucleotide excision repair
    DSAG12_01473 (rpoK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psyt03021]
    DSAG12_01473 (rpoK)
   03400 DNA repair and recombination proteins [BR:psyt03400]
    DSAG12_01473 (rpoK)
Transcription machinery [BR:psyt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DSAG12_01473 (rpoK)
  RNA polymerase III system
   RNA polymerase III
     DSAG12_01473 (rpoK)
  RNA polymerase I system
   RNA polymerase I
     DSAG12_01473 (rpoK)
DNA repair and recombination proteins [BR:psyt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DSAG12_01473 (rpoK)
SSDB
Motif
Pfam: RNA_pol_Rpb6 Big_4
Other DBs
NCBI-ProteinID: QEE15646
UniProt: A0A5B9DAM0
LinkDB
Position
complement(1564282..1564575)
AA seq 97 aa
MSRTLKRYDKYIEAEKKIKIGSIFITRYERSRIIGARALQLAFQASPFIEIPQGVNDPLE
IATYELENKMLPITIRRHLPNGTSQDVPVKWLINENY
NT seq 294 nt   +upstreamnt  +downstreamnt
atgagcagaacgttaaaaagatacgataaatatattgaagcagaaaaaaaaattaaaatt
ggttcaatttttataaccagatatgaacggagcagaattatcggtgctcgcgcattacaa
ctcgcgtttcaagccagtccattcatagaaattcctcaaggtgtaaatgatcctttagaa
atcgcaacctacgagcttgagaataaaatgttaccaatcaccattaggagacatttacct
aatggaacaagtcaagacgttcctgtaaaatggttgattaatgaaaattattaa

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