Paenibacillus terrae: HPL003_18355
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Entry
HPL003_18355 CDS
T01668
Name
(GenBank) DNA polymerase III polC-type (PolIII)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pta
Paenibacillus terrae
Pathway
pta03030
DNA replication
pta03430
Mismatch repair
pta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPL003_18355
03430 Mismatch repair
HPL003_18355
03440 Homologous recombination
HPL003_18355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pta03032
]
HPL003_18355
03400 DNA repair and recombination proteins [BR:
pta03400
]
HPL003_18355
Enzymes [BR:
pta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPL003_18355
DNA replication proteins [BR:
pta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPL003_18355
DNA repair and recombination proteins [BR:
pta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPL003_18355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
DEDDh_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AET60413
UniProt:
G7W2R8
LinkDB
All DBs
Position
3903092..3907408
Genome browser
AA seq
1438 aa
AA seq
DB search
MDGAEEKRKRLELLMKQVVMPTGVVEPYFLDGWIEQVEISRTNKDWNIIIAKETLVPAQV
YRAFCIQVQEKMNHIAKITFRFRYSEQVQSADIISEYWKLFLEWVHREIPSVNGWMNRAV
HEWEDGLLLLTMSDSMSLELARKKQIDQAIIKFYDKYFGLPMRIKIQVGESNQEALQQFQ
EKKMQEEREVIQQMMESMESDMPPLDEEEGDVRLQFGYDIKEPPVPMQEIQDEEKKVTLQ
GTIFGLDTKELRNGSTLFTYYLTDFSDSLQMKMFAKTKEDLKILSLLANGKWVKVRGRVE
YDRFMQIPELVMIPSDLVEVQAPPSRKDNAEEKRVEFHLHTKMSAMDAVSSIDQYVKTAA
KWGHKAIAVTDHGGVQCYPDAAKSAKKNGIKMIYGIEANVVNDAVEVVMQAQPLNLKTAT
YVVFDIETTGLSVTQNRIIEIAAVKMHEGKEVDRYATFVNPHERIPYNIQQLTNINDEMV
KDAPDIEPVIKEFVAFAGDAVLVAHNARFDVGFIQATLRNMGLPEMTNPVLDTLELARLL
FPTMKNHRLNTLTTKYKVALESHHRAIDDTVALTEVLNGLLNDAEQIKGMKMLDRLNDYV
GKDLSTVRPFHCCIYALNPIGKKNLYKLVSMSHTEYFKRVPCIPKSKLSEMRDGLLIISG
CEKGEFFEAVLNKSEEEAEEIAQFYDVLEIQPLTMYMHLVEKQLVSGPDALKTAVRKVCE
IGRRLDKPVIATGNVHYLETRDKLYRDITIHGITGFSPLKDIRKPDAHLRTTDEMLAEFE
FLGEEKAYEVVVKNTSELAERFEELELFPDKLFTPLLDGADEEIRNTCYETAKSIYGEEL
PEVVVARLEKELEPIIKYGFSANYLISERLVKKSNQDGYLVGSRGSVGSSVVATFLGISE
VNPLPAHYICGNPECRHSDWILDGSVPSGFDLPDKNCPKCGGKLKGEGQDIPFETFLGFK
GDKVPDIDLNFSGEYQPVAHNYTKVLFGEKSVFRAGTIGTVAEKTAFGFAKKYEEAHHKK
WRGAELNRLASGCTGVKRSTGQHPGGIVVVPDYIEVEDITPVQFPADDTSSEWKTTHFDY
HAFDANLLKLDILGHDDPTMMRMLQDLTGVDPTTIPMNDPKVMSMFNSTEALGVTPQQIR
TPVATYGVPEMGTKFVRQMLVESQPSSFADLLQISGLSHGTGVWLGNAQDLIKNNTCNIK
TVIGCRDDIMLFLIYKAGMDAGLAFKITESVRKGKGLSAEWIEEMKKCKVPQWYIDSCLK
IQYMFPKAHAAAYVISAVRTAYFKLYHPIEYYATYFSVRAADFDIELCCQGYDAIARKIV
EIEQLGFQAPPKEKGMLPILEMALEMTARGFSFKTIDLYRSEATRFKVDGDSLIPPFGAL
QGIGENAARNIAASREQGEFLSVEDFQQKSKASKTIVEMLSQMGCFRGLPESNQLSLF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacggagctgaagaaaagagaaaacggctggaactgctaatgaagcaagtagtgatg
ccgacgggagtggttgaaccttatttcttggacggttggattgagcaggtggaaataagc
cgtaccaataaggattggaatattatcatcgccaaggaaacactggttcccgctcaggta
tatcgggccttctgtattcaggtgcaggagaaaatgaaccacatcgctaaaatcaccttt
cggtttcggtatagtgagcaagttcagtctgcggatatcattagtgaatactggaagctt
tttctggaatgggtgcaccgtgaaatcccatccgtgaacggctggatgaaccgggctgta
catgaatgggaagacggcctattattgctgacgatgagcgatagcatgtcactggagctg
gcacgcaaaaagcagattgaccaagcaatcatcaaattctacgataaatattttggtctc
ccgatgcgtattaaaatccaggtgggtgaaagtaaccaagaggctttgcagcagttccaa
gagaaaaagatgcaggaagaacgtgaagttattcagcagatgatggaaagcatggaatca
gatatgccgcctctggatgaagaggaaggagatgtacggcttcaatttggctatgacatc
aaggagccccctgttccgatgcaagaaattcaggatgaagagaagaaagtcacgttacag
ggaacgattttcggtctcgatactaaagaactgcgcaatggaagtacattgttcacctat
tatttgaccgattttagtgattcgctgcaaatgaaaatgtttgccaaaacaaaagaagat
ctaaaaattctcagcttgctagctaatgggaaatgggttaaggtccgtggccgcgtcgaa
tatgatcgttttatgcaaattcctgagctggttatgattccttctgatctggtagaggtc
caggctcctccttcccgtaaagataatgcagaggaaaaacgggttgagtttcaccttcac
acgaagatgagcgcaatggatgctgttagctccattgaccagtatgttaaaacggccgcc
aagtgggggcacaaggcgattgcggtcaccgatcatggtggagtgcaatgttatcccgat
gccgctaagtccgccaagaaaaacggaattaaaatgatttatggtatcgaagccaatgtg
gtcaacgatgcggttgaggttgtgatgcaggcacagccgcttaatttgaaaacagcgact
tatgtcgtttttgatattgaaaccactggtctgtcagtcacacaaaatagaattattgag
attgctgctgtcaagatgcatgagggtaaagaggtagaccggtatgctacctttgtaaat
ccgcatgagcgtattccttataatattcagcaactgaccaacattaacgatgaaatggtc
aaggatgcaccggatatagagcccgttataaaggagttcgttgcttttgctggcgatgct
gtgctggttgcccataatgcgcgatttgatgttggctttattcaggctacgcttaggaac
atgggattacccgagatgacgaacccggttttggatacactggaattggcccgcctgctg
tttccaacgatgaaaaatcatcgtctgaacacactgactaccaaatataaggtcgcgctc
gagagccatcaccgggccattgatgatacagttgcgctaacggaagtattgaatggactt
ttgaatgatgcggaacaaattaaaggtatgaaaatgctcgatcgcttgaacgactatgtt
gggaaggatttatcgaccgttcgtcccttccactgctgcatttatgcgcttaatccgatt
ggcaaaaaaaatctgtacaaactggtttcaatgtcacataccgaatattttaagcgtgtt
ccttgtattcctaaatcgaaattgtcagagatgagagacgggctgcttattatttcaggt
tgcgaaaagggagagtttttcgaggcagttctgaacaagtcggaggaggaagccgaggaa
attgcacagttttatgatgtgctggagattcaacctttaaccatgtacatgcatctggtg
gaaaaacaactggtaagtggccctgatgctctgaaaacggcagttcgtaaagtatgcgaa
attgggcggcgactcgataagcccgttattgctacaggcaatgttcactatttggaaacg
cgtgataagctgtaccgtgatatcacgatacatggaattactggctttagcccgttaaag
gatatccgaaaaccggatgcgcatttgcgcacgacagacgaaatgctggcagaattcgag
tttctgggcgaggagaaagcctatgaagtcgttgtgaagaataccagcgagttggcggag
cggtttgaggagctggagctgttccctgataagctgttcacacctttgctggatggggca
gacgaggaaatccgcaatacttgctacgagacggctaaatccatttatggtgaggaattg
cccgaggtggtcgtagcccgtcttgaaaaagaactggagccgattattaaatacggtttc
tctgccaactatctcatttccgagcgactggttaaaaagtccaatcaggatggatacctg
gtaggttcgcggggttctgttggatcttctgtggttgctaccttccttggtatttccgag
gttaatccactgcctgcgcattatatttgtggtaatcctgaatgcagacatagcgattgg
attttggatggcagtgtgccgagcggatttgacttgcctgacaaaaactgtccgaaatgc
ggtggcaagctgaagggtgaggggcaggacattccgtttgaaacattcctagggtttaag
ggagataaggttcccgatattgacttgaacttctccggggaatatcagccagtcgcacat
aactatacgaaagtactgtttggtgagaaaagtgtattccgtgctggaaccatcggcaca
gttgcggaaaaaacagccttcggctttgcgaagaaatatgaagaggcgcatcataaaaaa
tggcgtggggccgaattaaacaggctggcttccggctgtacgggcgttaaacgcagcact
ggacagcatccgggcgggattgtcgtcgttcccgattatattgaggtcgaggacattacg
ccggtacaattcccggctgatgatacgagctcggaatggaaaacgacgcattttgattat
catgcttttgatgcgaacttactcaagctcgatattctgggccatgatgatccgaccatg
atgagaatgcttcaggatttgactggagtcgacccaacgacgattccgatgaatgatccg
aaggttatgagtatgttcaattccacggaggcgcttggcgtaacgccgcagcagatccgt
actcctgtcgccacctatggtgtacctgagatgggaaccaagtttgtacgtcagatgcta
gtggaatcacagccaagttcttttgccgatttgctacaaatatcgggtctgtcccatggt
acgggcgtatggttggggaacgcgcaggatttgatcaaaaacaatacctgcaacatcaag
accgtaatcggttgccgggatgatatcatgctattcctgatttataaggcgggaatggat
gcaggtctagcctttaaaattacggagagcgtgcgtaaaggtaaggggcttagtgcggaa
tggatcgaggaaatgaaaaaatgcaaggtgccgcaatggtacattgattcctgcctcaag
atccagtacatgtttccaaaggcgcatgccgcagcctatgttatttcagcagtgcggacc
gcctatttcaagctgtatcatccgattgaatattatgcgacctatttctcggtacgcgca
gccgattttgatattgaactgtgttgtcaggggtatgatgccatcgcgcggaaaattgtc
gaaatcgagcagctcggttttcaggctccaccaaaggaaaaaggaatgcttccgatcctg
gaaatggcgctggaaatgacggctcgcggcttcagtttcaagacgattgatttgtaccgt
tccgaggctactcgcttcaaggtagatggagattcactcattccgccgttcggagcgctt
caggggattggggaaaacgcagcacgtaacatcgcagcctcccgtgaacagggtgaattt
ttgtctgttgaggatttccagcaaaaatcgaaggctagtaaaacgattgtcgaaatgctg
tcccagatgggctgtttccgtggactgccggagagtaatcagctgtctctgttttaa
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integrated database retrieval system
