Pseudomonas taetrolens: NCTC10697_01096
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Entry
NCTC10697_01096 CDS
T08085
Symbol
cph2_2
Name
(GenBank) signaling protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC10697_01096 (cph2_2)
Enzymes [BR:
ptae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NCTC10697_01096 (cph2_2)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
SQF85360
LinkDB
All DBs
Position
1:complement(1129448..1131499)
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AA seq
683 aa
AA seq
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MKRDLKNSLSVTLLRIVLLAALAVGGVLSCAQIVFDAYKTRHSVEVDAERILDMFRDPST
QAVYSLDREMGMQVIEGLFQDTAMRHASIGHPNETTLAEKSRPLDDSPSRWLTDLIMGKE
RTFTTALVSREPFSEYYGDLSITLDTATYGQAFLLNALILFISGVMRALLMGLVLYLVYH
WLLTRPLSHIIENLASINPDRPGERVLPHIKGHERNELGIWVNTANQLLASIERNTRLRH
EAESSLLRMAEYDFLTGLPNRQQLQTLLGKILVDAGRSQRRVAVLCVGLDDFKSINEQYG
YQAGDQLLQALTDRMRVHNASLGALARLGGDQFALVPAHIEHPYEAAELAQSILDDLENP
FFLNPQSIRLRATIGITLFPEDGDTSEQLLQRAEQTMTLAKNSSRGRYQFYIASVDREMR
RIRELEKDLGEALLRDQLYLVYQPQIRYSDHRVVGVEALLRWKHPVLGMIAPDVFIPLAE
KNASIIAIGEWVLDRACHQLREWHVQGFGELRMAVNLSTVQLHHAGLPRMVNTLLQRYHL
PAHSLELEVTETSLMEDINIAAEHLLSLRHCGALIAIDDFGTGYSSLNYLKTLPLDKIKI
DKSFVQDLNDADDDATIVRTIIQLGHNLGMQVIAEGVETLEQETYVIREGCHEGQGYLYS
KPLNASEMSLYLKQAQHRNPVIV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgggacctcaaaaatagcctgtcggtcacgttattgcggatcgtactgctagcg
gcattggccgtaggcggtgtactgagttgcgcacagattgttttcgacgcatacaagacg
cgacattcggtcgaagtggatgccgaacgcatcctcgacatgtttcgcgatccatcgacg
caggcggtgtatagcctggaccgtgaaatggggatgcaggtcattgaagggcttttccag
gatacggctatgcgtcatgcctctatcggccacccgaacgaaaccaccctggccgaaaag
tcacgccccctggatgactcgcccagccgctggctgaccgatttaatcatgggaaaggaa
cgcacgttcacgactgcgctggtgagtcgcgaacctttcagcgaatactacggtgacctg
agcattaccctcgacacggccacctacggccaggcctttttgctcaatgccctgatcctt
ttcatctcgggtgtaatgcgtgccctgttgatggggctggtgctgtacctggtttatcac
tggctgctgacacgcccgctgtcacacatcattgagaatctggccagcatcaacccggat
cgccccggtgagcgcgtactgccgcacatcaagggccatgagcgcaacgaattggggatc
tgggtcaacactgccaaccagttgctggcctcgatagagcgtaatacgcggctgcgccat
gaagccgaaagctccttgttgcgcatggctgagtacgattttctgaccgggctgccgaac
cgccagcaattgcagacgctgctgggcaaaatccttgtcgatgcgggtcggtcacaacgc
cgcgtcgcggtgctgtgtgtcggcctggatgacttcaagagtatcaatgaacagtatggg
tatcaggccggcgaccaattgctgcaagccctgaccgatcgcatgcgcgtccacaatgca
agcctgggcgctctggcgcgtctcgggggcgaccagttcgcattggtaccggcccacatc
gaacacccctatgaagccgccgagctggcgcaaagtattctggatgacctggaaaacccg
ttcttcctgaacccgcaaagcatccgcctgcgcgccacgatcggtattacgctgttcccg
gaagatggcgataccagtgaacagctgctgcaaagagccgagcagaccatgacgctggcc
aaaaacagctcacgcgggcgctaccagttttatatcgccagcgtcgaccgtgagatgcgc
cgcatacgcgagctggaaaaagacctgggcgaagccctgctgcgtgaccagctctatctc
gtctaccagccgcagatccgctacagcgaccaccgcgtggtcggtgtcgaagccttgttg
cgctggaagcaccccgtactcgggatgattgcccccgatgtgttcatccccctggcagaa
aaaaacgccagcatcattgccattggcgagtgggtactggaccgggcctgtcatcagttg
cgtgaatggcatgttcagggctttggtgaactgcgcatggcggtcaatctgtccacggtg
cagctccatcacgccgggctgccacggatggtcaatacgctgttgcagcgctaccacctg
ccagcccacagccttgagctggaagtcaccgaaaccagcctgatggaagacatcaacatc
gccgctgagcacttgctgagcctgcggcattgcggggcactgattgcgatcgatgacttc
ggcacgggctattcatcactgaactacctcaagaccctgccactcgacaaaatcaagatc
gataaaagcttcgtgcaggacctgaatgacgctgacgacgatgcaaccatcgtgcgcacc
atcattcagctgggtcataacctggggatgcaagtcattgcagaaggggttgaaaccctt
gaacaggaaacctatgtcatccgtgaaggctgtcatgaaggccagggttatctgtacagc
aaacccttgaatgcaagtgagatgagcctttacctgaaacaggcacagcaccgcaatcca
gtgattgtgtaa
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