Parvicella tangerina: CRYO30217_01916
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Entry
CRYO30217_01916 CDS
T08372
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03030
DNA replication
ptan03410
Base excision repair
ptan03420
Nucleotide excision repair
ptan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRYO30217_01916 (polA)
03410 Base excision repair
CRYO30217_01916 (polA)
03420 Nucleotide excision repair
CRYO30217_01916 (polA)
03440 Homologous recombination
CRYO30217_01916 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptan03032
]
CRYO30217_01916 (polA)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_01916 (polA)
Enzymes [BR:
ptan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRYO30217_01916 (polA)
DNA replication proteins [BR:
ptan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CRYO30217_01916 (polA)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CRYO30217_01916 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRYO30217_01916 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
DUF3913
DUF1062
DUF421
Motif
Other DBs
NCBI-ProteinID:
CAG5082438
UniProt:
A0A916JMU5
LinkDB
All DBs
Position
1:complement(2140469..2143261)
Genome browser
AA seq
930 aa
AA seq
DB search
MKKLYLLDAYALIFRAHFAFIRNPRINSKGLNTSAIFGFVNSLLEVLNKEKPTHIAVVFD
VAGRNVREKIYEEYKANRDETPEDIRLAVPYIHKILEAMNIPALGVEGYEADDVIGTLAK
KAEKAGFQTYMVTPDKDYAQLVSENIFMWKPGRSGNPSEVWDVEKVKEKFDVERPEQVID
ILGLWGDSVDNIPGIPGIGEKTSKKLVKQYGSVEGLIEHAEELKGKQKENVINFAEQGLM
SKELATIILDVPVELDEKALVYEDPDNDKVIEVFSELEFRTLLKKVVKDEDASLVPTAST
PSEEDNGQMSLFGEQQETVEELPDEFKSLENAKELNYTLVEDEKGLKKALKSLSKYKEIC
FDTETSSLDELDTTLLGIALSGAKNEAWYIAVPQEFNARMIFRKALQKFFSNEKITWIAH
NVKFDLKVLKREKITVQGQLFDTMIAHYLLEPEQRHNMDVLSETYLNYKPVSIETLIGPK
GKNQKSMADLQPSEIKDYACEDADVTFQLFQLFKDRVDDSYLEKLFYEVEMPLVRVLMEM
EMEGINLDVEALGEFSEELNTELIDLQQRIIDAAGVEFNVDSPKQLGDVLFETMNLSEKA
KKTKTGQYKTDEATLVKLQGKHPIIDDILEYRQMKKLKSTYVDALPKLVNPKTGRIHTTY
FQTVAATGRLSSNHPNLQNIPIRSTRGKEIRKAFKARSTDYKIMAADYSQIELRIIAALS
GDKGMIEAFKSGQDIHAATAAKVFDVPLEEVSREQRSKAKMVNFGIIYGISAFGLSQRLG
ISRTEAKEIIDNYFEKYSRIKEYMDESIEFARKHEYVETILKRRRYLPKINAGNGMERGF
AERNAINAPIQGSAADVIKIAMINVQERMKKEALKSKLLLQVHDELVFDVHKDEVDLMRT
LAKEEMERAVQLEVPLEVEEGVADNWLDAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactttatttgctggatgcatacgcattgatctttcgtgctcatttcgccttt
attcgaaatcctagaatcaatagcaaaggattaaatacttctgcaatttttggttttgtg
aactcattacttgaggtgctcaataaggaaaaaccaacccatattgcggttgtttttgac
gtagcgggtcgtaatgtaagggagaaaatttacgaagagtataaggcgaatagagatgaa
actccagaagatatacggttggcagtaccatatattcataagattttagaagcaatgaat
attccagctcttggtgttgaggggtatgaagctgatgatgtgatcggtacattagcgaag
aaagctgagaaagcagggtttcagacctacatggtgactcctgataaggattatgctcaa
ctggtgtcagagaatatttttatgtggaaacccggacgatctggtaatccttctgaggtt
tgggatgtggagaaagtaaaagaaaagtttgatgtggagcgacctgaacaagtaattgat
attcttggtctatggggagattcagtagataatattccaggaattccaggcattggagag
aaaacttctaaaaagcttgttaaacagtatggaagtgtagaaggattgatcgaacatgct
gaagaactcaaaggaaaacagaaggagaatgtgattaatttcgctgagcaagggttgatg
tcaaaagaattggctacgattattttagatgtacctgttgaattggatgagaaagcgttg
gtttatgaagatccggacaatgataaagtaattgaggttttttctgaattagagttcagg
acactgctcaaaaaagtagtgaaagatgaagatgcttctctagttccaaccgcttcaaca
ccgagtgaagaggataatggtcagatgtcactctttggcgaacaacaagaaacagtggaa
gaacttccagacgagtttaaatctttggaaaacgctaaagagttgaactatactcttgta
gaagatgaaaaaggattgaaaaaagcattgaagagtttgtcaaaatataaggaaatatgc
ttcgatacggagacttctagtttggatgaactcgacacaacattgttgggtatagcatta
agtggagctaaaaatgaagcttggtatattgctgttcctcaggagttcaacgctagaatg
attttcagaaaagccttgcaaaaattcttttcaaatgaaaaaattacctggatcgctcat
aacgttaagttcgatctaaaagtgttaaaaagagagaagattactgtgcaaggtcaactt
ttcgatacgatgatcgctcactatctcttggaacctgaacaaagacataatatggatgtt
ctttcagaaacctacttgaattataaacccgtctctattgagaccttgataggcccaaaa
ggaaagaaccaaaagagcatggcagacctacagccatcagagatcaaggactatgcttgt
gaagatgctgatgtcactttccagctgtttcaattgtttaaggatcgtgtggatgactcc
tatttagaaaaactcttttacgaggtagaaatgccgctagtcagagttttgatggaaatg
gaaatggaaggaattaaccttgacgtggaagccttgggtgagtttagtgaagagttaaac
acagaactgatcgatttacaacagcgaatcatagacgctgccggtgttgagtttaacgtg
gattctccaaagcaattgggagatgtgctattcgagaccatgaacctgagtgagaaggcc
aagaaaacaaaaactggacaatacaaaacagatgaagctactttagttaaacttcaaggt
aagcacccgatcattgatgatattcttgaatatcgacagatgaagaagctgaagtcaact
tatgtagatgcgttacctaaattggtcaatcctaaaacagggcgtattcataccacttat
tttcaaacggtagcagctacaggacgtttaagcagtaatcatcccaacctacaaaatatt
cctataagaagtactagagggaaagagatcagaaaggcgttcaaagcgagatcaacggat
tataaaattatggcagcggattattcgcagatcgaattgaggatcattgctgctttaagt
ggtgataaaggaatgatagaagcgtttaagtccggacaggatattcatgcggctactgcg
gcaaaagtgtttgacgttcctttagaagaagtgtctcgtgagcaaagaagtaaagccaaa
atggtgaactttgggattatctacggaatttcggcttttggattgtcacagcgtttaggg
atttcccgtacggaggctaaagagatcattgataactattttgagaaatacagtcgcatc
aaagagtacatggatgaaagtattgaatttgcacgcaaacatgaatatgtcgaaaccatt
ctgaagcgaagaagatatttaccaaaaatcaatgcaggtaacggaatggaaagaggtttt
gcagagcgcaatgcgatcaatgctccgattcaaggttctgctgctgatgtaatcaaaata
gccatgatcaatgtgcaggaacggatgaaaaaagaagcgttgaagtccaaactattacta
caggtgcatgatgaattggttttcgatgtgcataaagatgaagttgatcttatgagaaca
cttgctaaagaagaaatggagcgtgctgttcaactagaagtcccgctagaagtagaggag
ggagtagcagataattggctggatgcgcattaa
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