Phyllopteryx taeniolatus (common seadragon): 133485635
Help
Entry
133485635 CDS
T09737
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
133485635 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133485635 (msh6)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
133485635 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
RhoGAP_pG1_pG2
Motif
Other DBs
NCBI-GeneID:
133485635
NCBI-ProteinID:
XP_061645650
EnsemblRapid:
ENSPTLG00010018829
LinkDB
All DBs
Position
11:13281905..13293444
Genome browser
AA seq
1370 aa
AA seq
DB search
MAKQSSLFNFFSKSPPPMSKPKPRAYPSSVDKSTSSPKEEAKLHSSKATKVKPKSVVKNS
KGGFNKLFSDKASTAKHVSSTSAFSAGSLVWTKLEGHPWWPCMVVPQPLTGQQMRGRGRA
QRIHVHFFDEPPTRGWVSAKYIREYKGSDSSDAKTGGLFFSGKPKIRHAMELADKVLFDS
PQKRLKMPLCTDPSDEEEEEEEMELDKSTVTDDEISDEDQDKNEELKSSEVSPRPTRSKG
NKAKRRRIVVASDSEGSDDEFKPEQATSSSEDEEEGVTVSSEAKEAESPQESEAESPIKP
VKRKRPTEKPAIAKPKIARTPSSAPKRVPASVAVDTKSRLSVFSAHDSFESQANGSATVG
GATIWDHEKLEWLQDHRRKDSQRRKVTDEGYDPTTLYVPEDFNNRNTPGMRQWWFIKSRM
LDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSNVLVQKGYKV
ARVEQTETPEMMEARCKTLVKPTKFDRVVKREVCRIITRGTQTYSVLDGTPAESQSKFLL
SLKEKPEDEGKGGCCRFYGVCFVDTSVGFFHVGQFPDDRHCSRLRTLIAHFAPAEVLFEK
GNPSVETRKILKASLAAVLQEGLNSSTQFWDAQKTLKTLSEEDYFRTSAGKDHGTGGSFL
PGILKKMTSGSDLLGLTPKEGYELALSSLGGCIFYLKKCLVDQELLSMANFEEYIPVDVE
MEKSARRKSVFAKTRQCMVLDGVTLANLEIFQNGSGGTEGTLLEHLDTCSSPFGKRLLKQ
WLCAPLCNPRSIRDRLDALEDLMAAQAQVSEVSDLLKKLPDLERLLSKIHSIGTPLKGPD
HPDSRAVLYEEVTYSKRKIADFLSAFEGFQTMQEIVNVFAAVTGNFQSTLLCKVVSLKSD
NGGLFPDLSAELKRWETAFDHQKARATGVISPKKGFDSEYDQALVGIKSCERKLQDYLDR
QKKRIGCKNMAYWGTGRNRFQMEVPDSISERNIPEEYEVKSTKKGWKRYVTKESEQLFYE
LQGFEEKRDAALKDCMRRLFYNFDKNYSNWKTAVECMAVLDVLLALTRYSQGGDGPMTRP
QVVLPDGDKQVAPFLELNGSRHPCVTKTFFGDDFIPNDIYIGCPRGSKEDDMQKRHASCV
LVTGPNMGGKSTLMRQCGLVIVLAQLGCFVPAESLRFTPVDRVFTRLGASDRIMAGESTF
FVELSETACILHHATKHSLVLLDELGRGTATYDGTAIACAVVKELAEKICCRTLFSTHYH
SLVEDFANNPAVCLGHMACMVENECEDPSQETITFLYKFISGACPKSYGFNAARLASLPE
EVIQSGHRKAREFEKSTISLRLFKKLCQFAEDPTQDKSHFAALVQMIQSI
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctcacttttcaatttcttctccaagtctccaccgccgatgtctaag
ccgaagcctcgagcctacccgtcctccgtcgacaagtccacctcgtctccaaaagaagaa
gctaaactacactcgagcaaggccaccaaagtcaaaccaaaaagtgtcgttaagaattca
aaaggaggattcaacaaactgttcagtgacaaggcgtcaacagccaaacatgtgagttcc
acaagtgcattcagtgcgggttctcttgtgtggacaaagctggaggggcacccatggtgg
ccatgcatggtggtacctcaacctttgaccggacagcagatgcgaggccgtggtcgggcc
cagcgcatacatgttcatttctttgatgaaccgcccacacggggatgggtcagcgccaag
tacatcagagagtacaaaggttctgacagtagtgatgctaaaactggagggttgtttttc
agtgggaagcctaaaatccgccatgcaatggagcttgcagacaaagtattgtttgatagc
ccacaaaaacgattaaagatgcctctttgcacagatccctcggatgaggaagaggaggaa
gaagaaatggagcttgataaatctacagtgactgatgatgagatcagtgatgaggatcaa
gacaaaaatgaggagttaaagtcatctgaggtcagtccacgtccaacacggtccaaggga
aataaagccaagcgccgccgcatagtcgtggcctcagatagcgagggatccgatgatgaa
ttcaaaccagagcaagccacaagcagcagtgaggacgaagaagaaggagtcacagtgagc
agtgaggccaaagaagcagagagcccacaagagtctgaagcggaaagcccgattaagcct
gtaaagcgtaaacgtcccacggagaagcctgcgattgcaaagccaaagatagccaggacc
ccttccagtgcaccgaaacgagttccagcatctgtagctgttgacacaaagtctcgttta
tctgtcttttcagcccatgacagctttgaaagccaagccaatgggtcagccacagttggc
ggagccacaatttgggaccacgagaagctggagtggttgcaggatcataggaggaaagac
agtcaaaggcgtaaagtcacggatgagggatatgatcctaccactctgtatgtgccagaa
gacttcaacaacagaaacactcctggtatgcgtcagtggtggtttatcaaatccaggatg
ttggacaccgttattttctacaaagttggaaagttctacgaactctaccacatggatgct
gtgatcggagtcaatgagcttggactgacttttatgaaagggacctgggcacattctggc
tttccagagattggttttgcacgcttctcaaatgtactagtccagaagggctacaaggtg
gcacgtgtggagcagactgaaaccccagagatgatggaagcccgatgtaagactctggtc
aagcccactaagtttgaccgtgttgtgaaaagagaggtgtgcaggatcattacgcggggc
acccaaacctacagcgtgttggatggtactcctgctgagagtcagagcaagtttctgtta
agtttaaaggaaaaacctgaagatgaaggaaagggtggttgttgccgtttctatggagtc
tgctttgtagatacttctgtgggcttcttccatgttggtcagtttccagacgaccggcat
tgttcacgtctacgcaccctgatcgcacactttgcccctgctgaagtacttttcgaaaag
gggaacccatccgttgaaacacgcaaaatactaaaggcttctctcgctgcagtgctacaa
gagggactgaattcaagcactcagttctgggatgctcagaagactctgaaaacgctttca
gaggaagactactttagaacaagtgcaggcaaggaccatgggacggggggtagttttctc
cctggtattcttaaaaaaatgacctctgggagtgatttgcttggtcttacccccaaggag
ggctacgaactggcactctcgtcattgggtggatgtatcttctacttaaagaagtgtctt
gtagaccaggagctactctccatggcgaacttcgaagaatacatccctgtcgatgtggaa
atggagaaatctgccagacgaaaaagtgtctttgctaagacacgccaatgcatggtcttg
gatggagtgactctggcaaaccttgagatatttcagaatggctctggcggtacagaggga
acgctgctcgagcacctagacacttgctccagcccctttggaaagcggctactcaagcag
tggctctgtgctcctctctgtaacccaagatccatcagggacagactggatgcactggaa
gacctgatggctgctcaagcacaagtgtctgaagtttcagacctgcttaagaagcttcca
gatttagagcgcctcctgagtaaaattcacagcattggcacaccactgaaggggccagac
cacccagacagcagggcagttctctatgaggaggtcacctacagtaagagaaaaatagca
gactttctttcagcatttgaaggtttccaaacgatgcaggagattgtcaatgtctttgca
gcagttactggtaactttcagtccacattactctgcaaagtggtcagtcttaagagtgac
aatggtggtctttttcctgacctgtctgctgaactcaagcgctgggagaccgccttcgac
caccaaaaagctcgtgccactggtgtcattagcccaaagaagggctttgactcagaatat
gaccaggctctggtaggcatcaagagttgcgagcgaaagctacaggattatcttgaccga
cagaaaaagagaataggctgtaagaacatggcgtactggggcactgggcgaaatcgcttt
cagatggaggtgcccgacagcatctctgagaggaatattccagaagaatatgaggtgaag
tcgacaaaaaaaggctggaagcgttacgtgacgaaggagtctgagcagctgttctacgag
ttacaaggatttgaggagaagagagacgctgctctgaaagactgcatgaggaggctcttc
tacaactttgacaagaactacagcaactggaagactgcagtggagtgcatggctgtgctc
gatgttctattggccttaacacgatacagccaagggggagatggtccaatgaccaggcca
caggtggttctcccggatggcgataagcaagtagcacccttcctcgagctcaatggttct
cgtcacccttgtgttaccaagacattctttggcgacgacttcattcctaatgacatctac
atcggctgcccccgtggcagcaaggaagatgacatgcaaaaacgtcatgcctcctgtgtc
ctcgtcacagggcccaatatgggtggaaagtcgactctcatgagacagtgtggacttgtg
attgtgctcgctcagttgggttgcttcgttcctgctgagagtctgcgtttcacaccagtc
gatcgagtcttcactcggctgggagcttccgatcgtatcatggctggagagagcaccttc
tttgttgagttgagcgagactgcatgtattctgcaccatgccaccaaacactcacttgtg
cttctggatgaattaggaaggggcacggccacatacgacggcacagccatcgcctgcgct
gttgtgaaggagctcgctgaaaagatctgctgtcgtaccctcttctctacacactaccac
tccctggtggaggacttcgccaacaatcctgcggtgtgcctcggccacatggcgtgcatg
gtggagaacgagtgtgaggacccaagccaagagaccattacattcctctacaagttcatc
tctggagcatgtcccaagagctatggcttcaatgctgctcgacttgccagcctaccagaa
gaggtcattcagtcagggcacagaaaggccagagagtttgagaagagcaccatcagcctt
agactcttcaagaagctctgccagtttgcagaagaccccacacaggacaagtcccacttt
gctgcacttgttcagatgatccaaagcatataa
DBGET
integrated database retrieval system
