Candidatus Phycorickettsia trachydisci: phytr_10980
Help
Entry
phytr_10980 CDS
T05372
Name
(GenBank) SucD succinyl-CoA synthetase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc00020
Citrate cycle (TCA cycle)
ptc00640
Propanoate metabolism
ptc01100
Metabolic pathways
ptc01110
Biosynthesis of secondary metabolites
ptc01120
Microbial metabolism in diverse environments
ptc01200
Carbon metabolism
Module
ptc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
phytr_10980
00640 Propanoate metabolism
phytr_10980
00660 C5-Branched dibasic acid metabolism
phytr_10980
Enzymes [BR:
ptc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
phytr_10980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AVP88024
UniProt:
A0A2P1P9R6
LinkDB
All DBs
Position
complement(1255230..1256108)
Genome browser
AA seq
292 aa
AA seq
DB search
MSILVDKNTKVICQGFTGDNGTFHSTQAINYGTKMVGGVTPGKGGHTHLGLPVFETVYDA
VKTTNADASVIYVPAPFAAEAILEAIDAELKLVVCITEGIPILDMLKVRRAINNSKTKLI
GPNCPGIITPEECKIGIMPGYIHKKGNVGIVSRSGTLTYEAVAQTTAVGLGQSTCIGMGG
DPIHGLGFVEIIEMFLADPDTTSIIMIGEIGGSDEENAAELIKNSKIKKPTVGFIAGRTA
PKGKRMGHAGAIISGNSGSPEHKVEKLKEAGVVVSDSPGEIGITLSNLLKNL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtctattttagttgataaaaataccaaagtaatttgccaaggatttactggagataat
ggaacatttcactccactcaggcaataaattatggtacgaaaatggtagggggggtgact
cctggcaaaggtggccacacacatttaggactgcctgtatttgaaaccgtgtatgatgct
gtaaagacaacaaatgcggatgccagcgtgatttatgttcccgctccttttgcagctgaa
gcaatattagaagcaatagatgcagagttaaagcttgttgtatgtatcacggaaggtatt
cctatacttgatatgctaaaagttcgcagagccattaataactctaaaacaaagcttatt
ggaccaaattgtccgggtattatcactccagaagagtgtaaaataggtattatgcctggt
tacatacataaaaaggggaatgtggggattgtttcaagatctggcacattaacttacgaa
gctgtagctcaaactaccgctgtaggactgggacaatctacttgcattggtatggggggc
gatcctatacatggcttaggatttgttgaaattattgagatgtttctagcagatccagat
acaacatctatcatcatgataggtgaaataggtggtagtgatgaagaaaacgctgcagag
cttattaaaaacagtaaaattaaaaaaccaactgttggatttattgcaggcaggactgcg
ccaaaaggaaaacgcatgggccatgctggcgcaatcatatcaggtaactctggttctcct
gagcataaagttgaaaagctaaaagaagctggtgtggtagttagtgactcaccaggagaa
attggtataactctatcaaacttacttaaaaatctttaa
DBGET
integrated database retrieval system
