Pyrenophora teres: PTT_20284
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Entry
PTT_20284 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pte
Pyrenophora teres
Pathway
pte03020
RNA polymerase
pte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTT_20284
09124 Replication and repair
03420 Nucleotide excision repair
PTT_20284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pte03021
]
PTT_20284
03400 DNA repair and recombination proteins [BR:
pte03400
]
PTT_20284
Transcription machinery [BR:
pte03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PTT_20284
DNA repair and recombination proteins [BR:
pte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PTT_20284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
EFQ84939
UniProt:
E3SAR1
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MDYNPEGDSINVRFLEASSQRASFIVQNFNLETANSLRRVMLSEIPTLAIDVVEVLDNTS
VLADEFVCHRLGLIPLSSKGVDDLVYSRDCDCEGYCDNCAVVLSLNAKCTGSEIMKVYAR
DLVIESRTPNDEVGKPVITDSEGTGSCIVKLRRGQAINMRCIAKKGIAKEHAKWAPSAAI
GFEYDPANKLHHLDYWHEEDPEKEWPKDEARINLDGGPENPDERFDFDAVPTRFFYDVET
VGGIDPDQIVTKGIHRLQLKLAEIVQGLNGGIAGPDDFGGAQSPTLNGAGYGGEAGGYTP
VGGPGGYGGGSAWGGPPQGAATPYGATPYGGQSW
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggactacaacccagaaggcgactcaataaacgtgcgcttcctcgaggcgagcagccaa
cgcgccagtttcatcgtccaaaacttcaacctagagaccgcgaactcgctccggcgtgta
atgctctccgagatccccacgcttgccatcgatgttgtcgaagtgctcgacaacacctct
gtccttgctgatgagttcgtctgccatcgtctcggtctcattcccttgtcttcaaaaggc
gtcgatgaccttgtatactcgcgcgactgcgactgcgaaggctactgcgacaactgcgct
gtcgtgctctcgttgaatgcaaagtgcacgggtagcgagattatgaaggtgtatgcgcga
gacttggtcatcgagtcccggacgccaaatgacgaggtcgggaaacctgtcattacagat
tcagaagggacgggcagctgcatcgtgaagctgaggagaggccaggccatcaacatgagg
tgcattgcaaagaaaggaatcgcaaaggaacatgcaaaatgggcgcccagcgcggcgatt
gggtttgaatatgatccagccaacaagctgcaccacttagactactggcacgaagaggac
ccagagaaggagtggcccaaagacgaagctcgcataaaccttgacggcggtcccgaaaac
ccagatgagcgattcgactttgatgctgtacctacgcgattcttctatgacgtcgaaaca
gttggcggcatcgaccccgatcaaatcgtcacaaaaggaatccatcgtctacagctgaaa
ctcgccgaaattgttcaagggctcaacggaggcattgcaggcccagacgactttggcggt
gcgcagagtcctacactgaatggtgcaggatatggcggtgaagcggggggctatacgcct
gttggcggaccgggaggctatggcgggggaagtgcgtggggtggcccgccgcaaggggca
gctacgccgtatggtgctacaccttacggggggcagagttggtag
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