Piliocolobus tephrosceles (Ugandan red Colobus): 111551116
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Entry
111551116 CDS
T07491
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pteh
Piliocolobus tephrosceles (Ugandan red Colobus)
Pathway
pteh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pteh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111551116 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pteh03021
]
111551116 (POLR1A)
Enzymes [BR:
pteh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111551116 (POLR1A)
Transcription machinery [BR:
pteh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111551116 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111551116
NCBI-ProteinID:
XP_023080701
Ensembl:
ENSPTEG00000031003
LinkDB
All DBs
Position
15:complement(87022537..87097269)
Genome browser
AA seq
1720 aa
AA seq
DB search
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENADPSASEIQEELEQYTAEIVQNNLLGSQGAH
VKNVCESKSKLTAVFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAVVHRTAGQKDS
EPLGIEETQMGKRGYLTPTSAREHLFALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVAAPRP
DEEKDSLIAIDRSFLSTLPGQSFIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLFPPSILKPFPLWTGKQILSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
PRSVPGFNPDSMCESQVVIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPRAVRAALNLPEATSYD
EIRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PHEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALRHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIQAAVQALNLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA
TCPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFRVYQLRFH
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA
GESGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDTQEERNPHREGARETQEQDEEVGSGTEEDPALPALLTQPRKPTHGQEAQGPEAMER
RVQAVREIHSFIDDYQYDTEESLWCQVTVKLPLMKINFDMGSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGITVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaaccctcgatacctggac
agcctggggaacccatcggcaaatggcctgtacgatttagctttgggtcctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctccgggcacctgggccac
attgagctcccactcacggtgtataaccctctcctcttcgataagctgtacctgctgctt
cggggctcttgtttaaactgccacatgctgacttgtccccgggccgtgattcacctctta
ctctgccagctaagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaatgctgatccctctgcttctgaaattcaggaggaa
ttagaacaatacacagctgaaattgtgcagaacaatctcctggggtcccagggcgcacat
gtaaagaacgtgtgtgagagcaagagcaagctcactgctgtcttctggaaggcacatatg
aatgctaagcgctgtccccactgcaagactgggcgatctgttgtccgaaaggaacacaac
agcaagttgacgatcacgtttccagccgtggtgcacaggacagctggccagaaggactcc
gagcccctgggaattgaggaaactcagatgggaaaacgaggatacttaacacccaccagt
gcccgcgaacacctttttgccctgtggaagaatgaaggattctttctgaactaccttttt
tcgggaatggatgatgatggtatggagtccagattcaatcccagtgtgttctttctcgat
ttcttggtggtgccaccctcaaggtatcgcccagtcagtcgcctaggagaccagatgttt
actaatggccagacggtgaacttgcaggctgtcatgaaggatgtagttctgattcgaaaa
cttctggccttgatggcccaagaacagaagctgccagaggaagtggctgcaccccgtcca
gatgaggaaaaagactctttgattgctattgaccgatcctttttgagtacacttccaggc
cagtccttcatagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagtgagatggacaaactaatgatggacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaaacacatgatgggaaagcgagtggactacgct
gcgcgctcagtcatctgcccagacatgtacatcaataccaacgaaattggaattcccatg
gtatttgccacgaaactgacctacccgcagccagttaccccgtggaatgttcaggaactt
aggcaagcggttatcaacggccccaatgtgcacccaggagcctccatggtcatcaatgag
gacggcagccgcacagccctgagtgctgtggacatgacccagcgagaggccgtggccaag
cagctcctgaccccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctgctactaaaccgacagcccaccctgcacagaccctcc
atccaggcccaccatgcccgcatcctgcctgaagagaaagtgctgcgactccactatgcc
aactgcaaggcctataatgccgactttgatggagatgagatgaatgcccatttcccccag
agtgagctgggccgggcggaggcctacgtcctggcctgcactgatcagcagtaccttgtt
cccaaggatggccaaccattggcgggactgatccaggatcacatggtttcaggtgcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgcgtgaagctttttcctccttccatcctgaagccctttcca
ctgtggacaggaaaacagattttgtcaacgctgctcataaatataatcccagaggatcac
atcccgctgaacttatctggaaaggcgaaaatcaccgggaaagcctgggtgaaggaaact
cctcgatctgttcctggctttaaccctgactcgatgtgcgagtcccaggtggtcatcagg
gaaggggagctgctctgcggagtgctggacaaggcgcactacgggagctctgcctatggc
ctggtccactgctgctatgagatctatgggggcgagaccagcggcaaggttctaacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacgtatcattgaagaatccacc
cactgtgggccccgggctgtcagggctgcattaaacctgccagaagccacatcgtatgat
gagatccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggcctacacagacagttcccagagaacagcctgcagatgatggtgcagtcg
ggagccaaaggttcaactgtgaacacgatgcagatctcgtgcctcctgggccagattgaa
ttggaaggtcggagacccccgctgatggcgtctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggctggtggctttgtcactggcagattcctcactggcatcaaa
cctcatgagttcttcttccactgcatggcaggacgagagggcctggtcgacactgctgtg
aaaaccagccgctcaggctatcttcaaaggtgcatcatcaagcacctggaggggctggtc
gtgcagtatgatctcacggtccgtgacagcgacggcagtgtggtacagttcctgtatggg
gaggatggcctggacatccccaagacacagtttctgcagcccaagcagttccccttcctg
gccagcaactacgaggtgataatgaaatcgcagcatctccatgaagttttatccagagca
gatcccaaaaaagctctccgccacttcagagctatcaaaaaatggcaaagcaagcacccc
aacacgctgctgagaagaggcgccttcttgagttattcccagaaaattcaggcggctgtg
caagccctgaaccttgagagtgaaaaccggaatggccgcagccccgggactcaggagatg
ctgaggatgtggtatgagttggatgaggaaagccgaaggaaataccagaagaaggcggcc
acttgtcctgaccccagtctgtctgtctggcgtcctgacatttactttgcatcagtttcc
gaaacgtttgaaacaaaggttgatgactatagtcaagagtgggcagctcaaacagagaag
agttatgagaaatcagagctttctctcgacaggttgaggaccttgctgcagctgaagtgg
cagcggtcactgtgtgagccgggtgaggctgtgggcctgctagctgcccagagcatcgga
gagccctccacccagatgaccctcaacaccttccactttgcaggcagaggcgagatgaac
gtcaccctgggcattccaagattgcgggagattctcatggtggccagcgccaacatcaag
acgcccatgatgagcgtgcctgtgctcaacaccaagaaagccctgaagagagtgaaaagc
ctgaagaaacaactcaccagggtgtgcttaggggaggtgttgcagaaaattgacgtccag
gagtccttctgtatggaagaaaaacagaacaaattccgggtgtaccagctgcggtttcac
ttcctgccacatgcgtattaccagcaggagaagtgcctgagacccgaggacatcctgcgc
ttcatggaaacaagattctttaaacttctgatggaatccatcaaaaagaagaataataaa
gcatcagccttcaggaatgtaaatactcgaagagctacgcagcgggatctggacaacgct
ggggagtcagggaggagtcggggagagcaggagggcgatgaggaagaagaggggcacatt
gtggatgctgaagctgaggagggggacgccgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggttgattatgagagtgaggaagaggaggagagggagggcgaggagaac
gacgatgaggacacgcaggaggaacgaaatccccacagggaaggtgctcgagagacccaa
gagcaagacgaagaggtgggctcaggcaccgaggaggacccggcccttcctgccctcctg
actcagccccggaaacccacccacggccaagaggcccaggggcccgaggccatggagcgc
cgggtccaggctgtgcgtgagatccactcgttcatagatgactaccagtacgacactgag
gagagtctgtggtgccaggtgaccgtgaagctccctctgatgaagatcaactttgacatg
ggctccctggtagtatctttggcccatggcgccgtcatctatgcgaccaagggcatcact
cggtgcctcctgaatgaaacaaccaacaataagaacgagaaggaacttgtgctaaacaca
gaaggaatcaatctcccagagctgttcaagtatgcagaggtcctggatctgcgccgcctc
tactccaatgacatccacgccatggccaacacgtatggcatcgaggccgcactgcgggtg
atcgagaaggagatcaaggatgtgtttgccgtgtatggcatcacggtcgaccctcgccat
ctctccctggttgctgattatatgtgctttgagggtgtttacaaaccactgaatcgcttt
gggatccggtcaaactcttccccgctacagcagatgacgtttgaaaccagcttccagttt
ctgaagcaagccaccatgctgggatcccacgatgagctgaggtctccttctgcctgcctt
gtggtcgggaaggtcgtcaagggcgggacaggtctgttcgagctcaagcagccgctgaga
tag
DBGET
integrated database retrieval system
