Parasteatoda tepidariorum (common house spider): 122271205
Help
Entry
122271205 CDS
T06106
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122271205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptep03400
]
122271205
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122271205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
HP0268
Motif
Other DBs
NCBI-GeneID:
122271205
NCBI-ProteinID:
XP_042907629
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MKKSKTILDFFSKSPSVPTKQGSSSNECSSTMKFVNDVPKRASIGEPDASPRRSHKKTLS
KTSMSTGKNCLSSSVHLYKNGVKSNEGKIPVVTSQESLEIGEDKSEESIEEKNIESATHT
QNSSTLYNDKENLNVDMSPIASSKRQKRKRIVVLSESEDSEDEYKPEKESESEDYDSENS
NVSTSESPPKKKNNVQSQTPSSRPSLDLNKYSKDSPSLHFGNSTPKVLSTFRTSSSTSQP
ELQTINNSPNGFASKISQKSCSNSMQKNSIADEKVTYLHDKLDWLKPENMKDKSGKRKSH
PDYDPETLYVPESYKKTLTPGLKQWWEIKSNNFDTVLFFKVGKFYEFYHMDAVVGVKELD
LSYMKGDFAHAGFPEVAFGKFSDILIQKGYKVARIEQTETPQMMEQRCKSMSHPTKYDRV
VKREICQVTSKGTRTLSYDEWSNNIGSSDNFLLSICEKHSDQDTSTEYGICFVDTTIGKF
TLGQFTDDRHQSRLLSFIALFPPVEIVYEKSTVSQKTLKLFDSNLIGVSKHALNLFWDGQ
KTLKFMADSGYYNGEDGNLQWPETILQILEKDDFLCQTPLKEYELAFKALGACICYLKKC
YIEDCLLTMKLFETYKPIDEAVVSNSAFQKDRKYMILDNVTLNNLAIVPNQPSAKSEETL
FGTLNFCETNFGKRELRKWLCSPLYQPTEIYDRLDAINDLKNITIFEDVQKCLRKLPDLE
RLLNKIHVHGLSRNKDHPETRAIFYEMEVYNRKKILDLISALKGFKDAASISKLFEPFVK
DFKSNLLKKCVSSSPDIGCFPLFEETLSYFSDAFDHNEAMKKGSIIPHPGVDSNYDSACK
EINDTNEELESYRKQQCKNLNCSMIKYVNVGKNRFLLEVPENQKFPSYYEFIGAKKGFKR
FYTKDIKDLLSVLSAAENTRDTALRDTTRKIFELFDKHYKKWQKAVQCLSTLDVLLSLTI
YCKTNEESVCRPKFRSRVNNEKPYLEIIDGRHPTFSKLYTGKDYIPNSVYMGEKDNSRDG
NEGGIVVLVTGPNMGGKSTLMRQTGTLLVMAHLGCYVPADSMELTPVDRIFTRVGANDKI
FKGESTFFVESSETASILHHATRDSFALIDELGRGTATYDGAAIAYATAKHLAKNIGCRT
LFSTHYHALVEDFHGVSNVGLGHMACMVEDDSGSPTLEKVTFLYKFVNGACPKSYGFNVA
RLAGIDEESVRRGFIKAQQMDCGARISKYIRNLMAVKSAEEIIKAL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtctaaaacaattttggatttttttagtaaaagtccctctgtcccgaccaaa
caaggttcttcatctaacgaatgttcctcaactatgaaatttgtgaatgatgttcctaaa
cgtgctagtattggtgaaccagatgcaagtcctaggcgatcgcataaaaagactttaagt
aaaacatcaatgagtacaggaaaaaattgtctatcttcgtcagttcatctttataagaat
ggagtgaagtcaaatgaaggtaaaattcctgttgttacctctcaagaatcattggaaatt
ggagaggataagtcagaggaaagtattgaagagaagaatattgagtcagcaacccatact
caaaattcttctacactatacaatgataaagaaaatctaaatgttgatatgtctccaatc
gcctcctctaagcgtcagaaacggaaaagaattgtagtattatctgagtctgaagattca
gaagatgaatataaacctgaaaaagaaagtgaaagtgaggattacgattcagaaaatagc
aatgtttcaacctctgaaagtccccccaaaaagaaaaataatgtacagagtcaaactcct
tcatcaagaccaagtttagacctcaataagtattccaaggattctccttcccttcatttc
ggcaattcaactcctaaagttctatctacatttagaactagttcttcaacttctcagcct
gagcttcagactattaataattctccgaatggttttgcctcaaaaatttcacaaaagtca
tgcagtaattccatgcagaagaatagtattgctgatgaaaaagttacatatttgcatgat
aaactagattggctaaagccggaaaatatgaaggataaaagtggtaagcgcaagtcacat
ccagattatgatcccgaaactttgtatgtgccagaaagttataaaaagactctcactcca
ggattgaagcaatggtgggaaataaaatccaacaactttgatactgttcttttttttaag
gttggaaaattttacgagttttatcacatggatgcagtagttggtgtcaaggaattggat
ttatcttacatgaagggtgactttgctcatgcaggatttccagaagtagcttttgggaaa
ttctcagatattttgattcaaaagggttataaggttgcaagaattgaacagacagaaact
ccacaaatgatggagcaacgatgcaagtcaatgtctcatcctacaaaatatgatagagta
gttaagcgagaaatctgtcaagttacctctaaaggcaccagaacgctgtcctatgatgaa
tggagtaataatattggatcaagtgataattttttgctgtctatttgtgaaaagcatagt
gatcaagatacaagcacagaatatggtatttgctttgttgatactaccattggaaagttt
acgctgggtcaatttactgatgacaggcatcaatccagattattatctttcatcgctttg
tttccccctgtggagattgtgtatgaaaaatctacagtgtcgcaaaaaactctaaaacta
tttgattccaatttgattggtgtgtccaagcatgcgttgaacttgttttgggatggtcaa
aaaacacttaagtttatggctgatagtggttattacaatggggaggatggaaaccttcag
tggcctgaaacaattttacaaatattagagaaagatgactttttgtgtcaaacaccattg
aaagaatatgaacttgccttcaaagctttaggtgcttgtatatgctacttgaaaaagtgt
tacattgaagattgtctgcttacaatgaagttgtttgaaacttataaacctattgatgaa
gcggttgtttcaaatagtgcttttcaaaaagatcggaaatatatgattcttgacaatgtt
actctcaacaacttagcaattgtaccaaatcagccatctgctaaatcagaagaaacttta
tttggaacattgaatttctgtgaaacaaattttgggaaaagagaacttcgcaaatggctt
tgctcacccttatatcaaccaacagaaatttacgacagactagatgctattaatgatctt
aaaaacataactatttttgaagatgttcaaaaatgcttgagaaaattgcctgatttagag
agattactaaacaagatacatgtgcatggcttatcacgtaataaagatcatcctgaaact
cgtgccatattttatgagatggaagtttacaataggaagaaaattttggatcttatctca
gctctaaaaggtttcaaagacgctgctagcatatctaagctatttgagccttttgttaag
gatttcaaatcaaatttgcttaaaaaatgtgtatcatcatctccagatattggttgcttc
ccattatttgaggaaactttatcatatttttctgatgcttttgaccataatgaggccatg
aaaaaaggtagcataatacctcatcctggtgtggatagtaactatgattctgcatgtaaa
gagataaatgataccaatgaagaattggaatcttatcgaaaacagcaatgcaaaaacctt
aactgttctatgatcaagtatgttaatgttggaaaaaatcgtttcttattggaggtacca
gaaaatcaaaaatttccaagctattatgaatttattggtgcaaaaaagggcttcaagaga
ttttatacgaaggatattaaagacctattatcagttttgtctgcagctgaaaatactaga
gatactgctttacgagataccactagaaaaatttttgaactatttgataaacactataag
aagtggcagaaagcagtccaatgcttatcaactcttgatgttttactaagtctgactatt
tactgtaaaacaaatgaagaaagtgtttgtaggcccaaatttcgttccagagttaacaat
gaaaagccttatcttgaaattattgatggaagacatcctacattttcaaagctgtacact
ggcaaagattatattcctaatagtgtgtacatgggggaaaaagacaattcacgtgatggt
aatgaaggcggaatagttgttttagttactggacctaacatgggtggaaaatccacatta
atgagacaaactggaacccttttggtgatggctcacttgggttgttatgttcctgctgat
tcaatggaactaactccagtagatagaatttttactagagttggagccaatgataaaatt
ttcaaaggagaaagcacattttttgttgagtctagtgaaactgccagtatattgcaccat
gctactagagattcatttgctcttattgatgaacttggtagaggaactgctacctatgat
ggggcagctattgcttatgccactgcaaaacatttagctaagaacataggctgccgcact
ttattttcaactcattatcatgctcttgtggaggattttcatggtgtgtcgaatgttgga
cttggacacatggcatgcatggttgaagatgatagtggaagccccactttagaaaaagtg
acatttctttataaatttgttaatggtgcttgtcctaagagctatggcttcaatgttgct
cgattggctggaatagatgaagagagtgttcgcagaggtttcattaaagcgcagcaaatg
gattgtggtgctagaatttcaaaatacatcagaaatcttatggctgtaaagtctgctgag
gaaataatcaaagctttgtga
DBGET
integrated database retrieval system
