Puntigrus tetrazona (Sumatra barb): 122325032
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Entry
122325032 CDS
T08985
Symbol
esr1
Name
(RefSeq) LOW QUALITY PROTEIN: estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122325032 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122325032 (esr1)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
122325032 (esr1)
Nuclear receptors [BR:
ptet03310
]
3. Estrogen like
3A. Estrogen receptor
122325032 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
Motif
Other DBs
NCBI-GeneID:
122325032
NCBI-ProteinID:
XP_043075798
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Position
20:complement(13671104..13683267)
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AA seq
620 aa
AA seq
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MSAACVFPXVMSGGQTSGEAAGARQRRRTCSNPEREDLEGLSLAPAAHKLSPMYPKEEHS
AGGISSSVNYLDGAYEFPNSTQTYGTSSPTEPASVGFYPAPPDPHTAPAEEHLQTLDTRS
GSPLMFAPSSPQLSPYLSHHGGHHSTHQVSYYLDTPSSTVYRSSVVCSQQTGIGLCEELC
SPTDRQELYPGSRAAGGFDSEKEMRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHND
YVCPATNQCTIDRNRRKSCQACRLRKCYEVGMMKGGIRKDRGGRAIRCERRRSANEDRVK
SYSEQSSRTGRKTAPPQDRRKKSGGGGVSASCMPPDQVLMLLLGAEPPAVCSRQKHSRPY
TEITMMSLLTNMADKELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIH
SPGKLIFAQDLILDRSEGECVEGMAEIFDMLLATVARFRSLNLKLEEFVCLKAIILLNSG
AFSFCSSPVEPLMDSFMVQCMLDNITDALIYCIGKSGASLQLQSRRQAQLLLLLSHIRHM
SNKGMEHLYRMKCKNRVPLYDLLLEMLDAQRFHSSGKVQRPWPQSEKDPPSTPTTSNSSP
SRGPGAVLPNTACHEQSPDP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgtgtgtgtttccantggtgatgtctggagggcagaccagcggagaggct
gctggtgccaggcagcgacgcaggacctgctcgaacccggagagagaagatctggaggga
ctttctttagcacccgctgcccacaaactctcgcccatgtaccctaaggaagagcacagc
gcaggagggatcagttcctctgtcaactatcttgatggagcctatgagttcccgaactcc
acacagacctacggcacctcgtccccaaccgagcctgcctcggtcggattctacccggct
cccccggacccccacacggcccctgctgaagaacatctgcagaccttagacaccagatcc
ggcagccctcttatgttcgcaccctccagccctcagttgtctccgtacttgagccatcat
gggggacaccactcgacccaccaggtgtcctactatctggacaccccttctagcactgtc
tacaggtcgagtgtggtgtgctctcagcagacaggtattggtttgtgtgaggagctgtgc
agccccactgacagacaggagctgtaccccggatcaagagccgcaggagggttcgattca
gagaaggagatgcgcttctgtgcggtgtgcagtgactatgcgtctggctatcactatgga
gtctggtcctgtgagggatgcaaagctttcttcaagagaagcattcaaggtcacaatgat
tatgtttgtccagcaaccaaccagtgcactattgacagaaaccgcaggaagagctgccaa
gcatgcagactacgcaagtgttatgaagtaggcatgatgaaaggaggtattcgtaaggac
cgcggaggccgcgctatcaggtgtgagaggaggaggagcgctaatgaagaccgtgtcaag
agctacagtgagcagtcgagccgcaccggccggaaaacggctcctccgcaggacaggagg
aagaagagcggcggcggtggggtcagcgcttcatgcatgcctcctgaccaggtgctgatg
ctgcttctgggggcagagccgccggccgtctgctcgcggcagaaacacagccgcccgtac
accgagatcaccatgatgtccctgctcacaaacatggctgacaaagagctcgttcacatg
atcgcctgggctaagaaagtaccaggtttccaggatctctctctgcacgatcaggttcag
ctgttggaaagctcttggctggaggtgttgatgatcggcctcatatggaggtctattcat
tcgcctggaaaactcatctttgctcaggatctcatcctcgataggagtgaaggagaatgt
gtcgaggggatggctgagatttttgacatgctcttggcgactgtggcacgcttccgtagc
ctcaacctcaagctggaggaatttgtttgcctcaaagccatcatacttctcaattctggt
gcattttcattctgctccagtccagtggagcccttgatggacagcttcatggtacagtgc
atgctggacaacatcactgatgccctcatttactgcattggtaaatcaggtgcttctctg
cagctccagtcccgccgtcaggcccagcttctgctgctgctctcacacatcagacacatg
agcaacaaaggaatggagcacttataccgcatgaaatgtaagaatcgagtcccgctgtat
gaccttttgttggagatgctagacgcccagcggttccattcttcaggaaaggtgcagaga
ccgtggccacagagtgagaaagaccccccttctacaccaacaaccagcaacagcagcccc
tccagaggtcctggagccgtgctgcccaacactgcctgtcacgagcagagtccagacccc
tga
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