Puntigrus tetrazona (Sumatra barb): 122329501
Help
Entry
122329501 CDS
T08985
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122329501 (trdmt1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
122329501 (trdmt1)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122329501 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
122329501
NCBI-ProteinID:
XP_043081698
LinkDB
All DBs
Position
24:complement(1425635..1431062)
Genome browser
AA seq
382 aa
AA seq
DB search
MENVEPLRVLELYSGIGGMHYALKESSLRAEVVAAVDVNTTANEIYKHNFPNTPLLPKTI
EGMALQDFDKLNFDVILMSPPCQPFTRIGLQGDVADPRTKSFLYILELLPRLSKRPSFIL
LENVKGFEISAARDSLLKTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRRPGSFSFL
TSAEIIEGFPESESADSLTLPHNQPASSECEREKTGAIIFKMETVQELERKRIQDSQETV
RRLQDFLQKDKDMDQYLLAPKTLLRYALLMDVVQPGSRRSVCFTKGYGHYVEGTGSVLQS
CVDVELESVFKNLELLSEEDKLKQLLQLKLRYFTPREIANLMGFPADFTFPNHISVKQQY
RVLGNSLNVHVVSHLIRLMISK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggagccactccgtgttctggagttatacagcggaataggagggatgcat
tatgctttaaaggagagctcgcttcgtgctgaagttgttgctgctgtggatgtcaacaca
acagccaatgaaatctacaaacacaacttccccaacaccccgctcctgccaaaaactatc
gagggcatggcattacaggattttgacaaactgaattttgatgtgattttgatgagccca
ccatgtcagccgttcaccaggattggtttgcagggagacgttgctgaccccagaactaag
agcttcctctatatcctggagcttctgccaaggctcagcaagcggccaagcttcattctg
ctggagaatgtgaagggctttgagatctctgctgcaagggattctttgcttaagacgttg
agagagtgtgactacagctttcaagagtttctgatttcaccaacatctcttggtatacca
aactctaggctcagatacttcctcattgcaaagagacgaccgggatccttctcattcctg
acttcagcagagattatagagggcttccctgagtctgaatcagcagacagtctcactctt
ccacacaatcagcctgcatcatctgagtgtgagagagaaaagactggggctatcattttt
aagatggagacagtgcaagagttggaaaggaagaggatccaggacagtcaagaaacagtc
cggaggctgcaggacttcctgcagaaggataaagacatggatcagtatttgttggccccc
aaaaccctgctcagatatgctttactgatggatgtagttcagcccggcagcaggagatca
gtctgctttactaaaggttatggccactacgtggagggcacgggctctgtcctgcagtcc
tgtgtggatgtggagctcgagagtgtgttcaagaacctggagctgctatccgaagaggac
aaactaaagcagcttcttcagttaaagctgagatacttcactcccagagagatcgccaac
ctcatgggctttcccgcagatttcacttttccaaatcacatttccgttaagcagcaatac
cgtgtgctgggaaacagcctgaacgtccatgtggtttcacatcttatacgtctcatgatc
tcaaaataa
DBGET
integrated database retrieval system
