Puntigrus tetrazona (Sumatra barb): 122342017
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Entry
122342017 CDS
T08985
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04020
Calcium signaling pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122342017 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122342017 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122342017 (grin2ca)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
Glutamate (ionotropic)
122342017 (grin2ca)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
122342017
NCBI-ProteinID:
XP_043091745
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All DBs
Position
3:25106181..25162861
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AA seq
1400 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVLCAPRCQCRPFGMVEPTVNVAVVFSGSAYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKMMEEYNWDSFVVVTSM
YPGYDSYVDYIRSFIDTSYFLWELQDILTFDMSADGMNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFSMAREVGLVGPGYIWFIPSLAVGNPNMPPPDSFPIGLISIITDRWKMSLRNRV
RDGVAIVVKGVESFRKQRGFVPDGHMDCQSPERPSTNDTLYRYMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRGRQWDKVGNYESGILQMRYPVWPRYGTFLEHVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYCSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRKSERLDFLLGISRGIYSCFNGVEDTDRKGNMQSPDVTTSYTQ
ANMLKMLQTAKDIVSSARVENSLDNATKTIENWSRRDPEAARPSLPTCLIGTDFSHSRLP
CIASVTDNHSPYPQNMDSTTQHLLEKPHVGTRPTSLRYTLPARTSHHHIYERTLPISSLS
SPHIAMRDPPPPTAPKPHVYVDQSCHHPTSRYVSYRDFQVPDIFVEHQEPSGSHKQYMAG
LGRKKRSHSYVATSPETRRRDDYDVPQSCLAELKSNHLVENHSHTTPCMRSHFQRPGSSC
NSCTKLYLEPEMDDVPLLGKDKMNRRASFLRATWGGDRIRQLDEKPSTSASTTSCINMPD
LFPRVVVTNPKPSKMYGSTGNNLRYNMAVEPAYLDPAHMGSYPYKPQKFKYSKSIRLPSY
REAILQNTAALRRSSSTLVHGHYSTYLNSYTDLPVYLGPVPQGPAHFHEHSKDTCHLFPC
VNHCPENAALVPRLGSRPVLYQSTAVGGYEGAGRSHEEALHTVPVSSVRRDRRQVLVARN
VHSPYAPRPWGRVSSLESEV
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctaggctgtctcagcgacacactgtggctgccgttgctgctgctgctg
tctgtcctctgcgccccccgctgccagtgtcgcccgttcgggatggttgagcccaccgtg
aacgtggcggtggtgttcagcggctccgcctaccagatggagatcaaggggcgcctgagc
cgggagaacttcctggacctgccgctggaggtgaaccccatcactgtgctggtgaacaac
accaacccgcgcaccctactgacgcgcatctgcgacacgctggctgctaacagggtgcac
ggggtggtctttgaagataacattgggtccgaggccgtggcgcagatcctagacttcatc
tcaacgcagacggctgtgcctatagtgggcatcagcgggggatcagccgtcgtcctgcct
cacaagggcgacggctctaccttccttcagctgggctcctccatcgagcagcagatcaat
gggatgttcaagatgatggaggagtacaactgggacagttttgtggtggtgaccagcatg
tacccgggctacgactcttatgtggactacatccgctccttcatcgacacgtcttacttc
ctctgggagctgcaggacatcttgacgtttgacatgtcggccgacggcatgaacgacctc
cgagcgcgccgcttactccagcagatcgacgctcaggtgctgctggtgtactgctcgcac
gacgaggcccagtacctcttcagcatggccagggaagtgggtttggtgggtccggggtat
atctggttcattcccagccttgcagtgggaaaccccaatatgcctcctccagacagcttc
cccatcggactgatcagcatcatcaccgatcgctggaagatgagcttgagaaacagggtc
agggatggggtggccatcgtggtgaagggagtggagagcttccgcaagcagagaggcttt
gttcccgacggacacatggactgtcagagtccggagcggccgtccaccaatgacactctc
tacaggtatatgctgaacgtgtcctgggagaacactgacttttccttcaacagtgatgga
tatctggtcaacccttccatgatcataatcactctggaccgcgggagacagtgggataag
gtggggaattacgagtctggtatcctgcagatgaggtatcccgtgtggccacgttatggg
accttcctggagcacgtgtctgataaccgtcacttgacggtggccacgctggaggaaagg
ccttttgtgatcgtcgaagctgtggatcctgttactggcacctgcctcagtaacactgtc
ccctgcagacgacagtcgaacaagacagaaacgatagtcggacacactgagccttacacc
aaactgtgctgcaaaggcttttgcatagacattttgaaaaagctctctcgcaacatcaag
ttctcctacgacctctacttggtcaccaatggcaaacacggcaagctggtgcgagggatc
tggaacggtatgatcggagaggtgttttataagcgagcagacatggccattggttctctg
accataaatgaggagcgctctgagatcattgacttctctgtgccgtttgtggagactggc
atcagtgtgatggtggccagaagcaatggaactgtatctccgtcagccttcctggagccc
tacagcccagcggtgtgggtgatgatgtttgtcatgtgtcttacagtcgtggcggtgact
gtgttcgtgtttgaatactgcagtcctgtgggctacaaccgcagcctggtcagtgccaaa
gatccaggtggtccgacgttcaccattgggaagtcggtctggctgctatgggggatcgtc
ttcaacaactcagtgcccattgaaaaccccaaaggcaccaccagtaagatcatggtgctg
gtatgggctttctttgctgtgatcttcctggccagctacacggccaacctggcagccttc
atgatccaggagcagtacatcgacactgtttctggactgagtgacaagaagttccagaaa
ccgcaagaccaatatcctccgttccggtttgggaccgtgcccaatggcagcacagaacga
aacataaggagcaattatcccgaaatgcattcccacatggttaagtacaaccagaaaggt
gtggaggatgcgctcaacagcctcaaaactgggaagctggacgcctttatatatgatgca
gctgtgcttaactacatggccggtaaagatgaagggtgtaaattggtgacaatcggtagt
ggaaaggtatttgcaacaacaggctacggtattgcccttcagaaggaatctcgctggaag
cgcccgatagacctcgctctcctccagttccttgctgatggtgacactcagaagctccag
acggtgtggctcactgggatctgtcgtaacgagaagaaagaggtgatgagctctaagctc
gacattgacaacatggccggagtgttttacatgcttctagtggccatgggtctcagtcta
ctggtctttgcctgggaacatctactgtactggaagctacgtcattctgtccgcaaatct
gagcgcttggacttcttgctgggaattagcaggggaatctacagctgctttaatggtgtg
gaggacacagaccgtaaagggaacatgcagagcccagatgtcaccaccagttacactcag
gccaacatgctgaagatgctccaaactgctaaagacattgtctcatctgcgagagttgaa
aactccctggacaatgccacaaagaccattgaaaactggagtcgacgtgatccagaggca
gccagacccagccttcctacctgcctcatcggaacggacttcagccatagccgcctgccc
tgcatcgctagcgttacagacaaccactcaccgtaccctcaaaacatggatagcaccact
caacacttgctggagaagcctcatgtgggaacacggcctacctcactgcgctacactctt
cctgcgcgtaccagccaccaccacatctatgaacggacgctacccatatctagcctcagc
agtccccatattgccatgagagacccaccacctcccacagccccaaaaccacatgtgtac
gtggaccagtcctgtcaccaccctacctctcgctacgtctcttaccgcgactttcaggtg
ccagacatctttgtggaacaccaggaaccttcgggaagccataaacaatacatggcaggc
ctgggtcgcaaaaagaggtcccacagctacgtagcaacatctccggaaactcgtcgaagg
gacgactatgatgttccccagtcttgtctggctgagctcaaaagcaaccacctcgtggaa
aaccactcccataccacaccctgcatgagaagccacttccagagacccggatctagctgc
aactcctgcacgaagctgtacctagaaccggagatggatgatgttcctcttctagggaaa
gataaaatgaaccgccgcgcctcttttctcagggccacatggggtggtgacaggatccgg
cagctggatgagaagccctccacctctgcatccactaccagctgcatcaacatgcctgat
ctattccctcgagtggtggtgaccaatcccaagccttcaaagatgtacggcagcactggt
aacaacctacgctacaacatggctgtggagccagcctatctggatccagcccacatgggc
tcctacccatacaagccacagaagttcaagtactcaaagtctatccgccttccttcatac
cgggaagcgatcctacagaacacggcggcccttcggcgctcctcttccacactagtgcat
ggacactactcaacatacctgaactcttacacagacctgccggtgtatttgggtcctgtt
ccgcaaggacctgctcacttccatgagcattccaaagacacgtgccacttgtttccatgc
gtcaaccattgcccggaaaatgccgccttggttccccggttaggcagcagacctgtgctg
taccagagcactgctgttggaggctacgagggggccgggcgttcacacgaggaagcgttg
cacactgtaccggtctcttccgtgcgcagggaccgcaggcaggttctagtggcacggaat
gtacacagtccctacgccccccggccctggggtagggtatctagtctggagtcagaggtt
tga
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