Puntigrus tetrazona (Sumatra barb): 122346463
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Entry
122346463 CDS
T08985
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
ptet03013
Nucleocytoplasmic transport
ptet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122346463 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
122346463 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122346463 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122346463 (xpo1a)
03009 Ribosome biogenesis [BR:
ptet03009
]
122346463 (xpo1a)
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122346463 (xpo1a)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122346463 (xpo1a)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122346463 (xpo1a)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122346463 (xpo1a)
Pre-60S particles
122346463 (xpo1a)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122346463 (xpo1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122346463 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Sec7-like_HUS
BspA_v
Motif
Other DBs
NCBI-GeneID:
122346463
NCBI-ProteinID:
XP_043097023
LinkDB
All DBs
Position
1:complement(26236200..26248343)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPNSV
EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVQATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMMQLKQMLPL
NTNIRLAYSNGRDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSTSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQERLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVLQLGRIYLDMLNV
YKCLSENISSAIQSNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGSHITGEIPKIFDAVFECTLDMINKNFEE
FPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTM
LQNIAQEEGAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI
TLNAGTTSSNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDSTDLFLEEREAALRQAQEEKHKLQMSVPGILNPHELPEEMCE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagatatgaccatgttggcggatcacacagcacggcagttgctggacttcagt
caaaagctagacatcaacctgctggacaatgttgtcaactccatgtactatgatgtggga
tctcagcaaagactggcgcaggaagttctcaccaacctgaaggaccacccagatgcctgg
accagagtggacaccatactggagttctcgcagaacatgaagacaaagtactacgctctt
cagatactggagaccgtgatcaaaacacgctggaagattcttccgcggaatcagtgtgaa
ggaattaaaaagtacgtcgttgggctgattatcaagacttcctctgatcccaacagcgta
gagaaggaaggggtttacatagcaaagctcaacatgatccttgtgcagattctgaagcag
gagtggccgaagcactggcccacgttcatcagtgacattgtgggagcgagtcgcaccagc
gagagcctgtgtcagaacaacatgatcatcctgaaactcctcagcgaggaggtgtttgac
ttctccagcggccagatgactcaggtcaaagccaagcacctgaaggacagtatgtgcaac
gaattttctcaaatcttccagctgtgccagtttgtcatggaaaactcccagaatgcccct
ctggtccaagccacgttggagacccttcttcgtttcctgaactggattccgcttggctac
atatttgagaccaagctcatcagcacgctggtgtacaagtttctgaatgttccgatgttc
cggaacgttactctgaagtgtctgacggagatcgcaggtgtcagtgtcagtcagtacgag
gagcagtttgtcaacctgttcactctcaccatgatgcagctcaaacagatgctgccactg
aacacaaatatccgtttggcgtattcaaatgggagggacgatgagcagaacttcatccag
aacctcagtctgtttctctgcaccttcctcaaagagcacggacagctgatagaaaagaga
ctgaacctcagagagacgctcatggaggctctgcattacatgctgctggtgtccgaggtg
gaggagacggagatctttaagatctgtctggagtactggaaccacctggccgctgagctc
tacagagagagtcccttctctacctccacctctccgctgctctccaccagccagcacttc
gacgtcccgccccgcagacacctctacctgcctgtgctctccaaggtgcgtctgctgatg
gtgagccgcatggctaaaccagaggaggtcctggtggtggagaacgatcagggcgaggtg
gtgagagaattcatgaaggacacggactccatcaacctctacaagaacatgagagagact
ctggtctacttgactcatctggactatgcggatacggagcggatcatgaccgagaagctt
cataatcaggtgaacggtaccgagtggtcctggaggaacctgaacacgctctgctgggcc
atcggctccatcagcggggccatgcatgaagaggacgagaagagattcctcgtcaccgtc
attaaggacttgctgggtctgtgtgaacagaaaagagggaaagacaacaaggccatcatc
gcatccaacatcatgtacatcgtcggccagtacccacgattcctcagggctcactggaag
ttcctcaagactgtggtcaacaagctgtttgagttcatgcacgagacccatgatggcgtg
caggacatggcctgcgacaccttcatcaagatcgctcagaagtgcaggaggcatttcgtg
caggtccaggtgggggaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccgcagcaggtgcacacgttctacgaggccgtgggctacatg
attggagcgcagacagaccaggctgtccaggagcgcctgatcgaaaaatacatgctcctc
cccaaccaagtgtgggacagcatcatccagcaggccaccaagaacgtggacatcttgaag
gacccagagacggtgcgtcaactaggcagcatccttaagaccaatgtgagggcgtgtaaa
gctgtgggtcacccgttcgtcctgcagctgggccgcatttacctggacatgctcaatgtc
tacaagtgcctgagcgagaacatctcttctgccatccagagcaacggcgagatggtgacc
aagcagcctctgatacggagcatgcggacggtgaagagagagacgctgaagctcatctcc
ggatgggtcagccgctccaacgacccacagatggttggagagaactttgttccacctttg
ctggaggcggttctcatcgactaccaaaggaacgtaccggcagctcgagaaccagaagtg
ctcagcactatggcgaccatcgtcaacaaactgggctctcacataacaggagagatcccc
aaaatattcgacgccgtgttcgagtgcacccttgacatgatcaacaagaacttcgaggag
ttccccgagcacaggacgcatttcttctacctgctgcaagcggtcaactcccagtgtttc
ccagcattcctgtccatcccaccagcccagttcaaactggttctggactccatcatctgg
gctttcaaacacaccatgaggaacgtggccgacacagggcttcagatcctgttcacgatg
ctgcagaacatcgcgcaggaagagggagcagctcagagcttctatcagacctacttctgc
gacatcctgcagcacattttctccgttgtcacggatacgtctcatactgccggtctgacg
atgcacgcctccatcctcgcctacatgtttaacctggtggaagaaggcaaaatcagcatc
accctgaacgcaggcaccacgagcagcaatcagggctacgtgcaggagtacgtggccaat
cttctgaagacggccttcccgcacctgcaagatgcccaggtgaaggtgtttgtcacgggt
ctgttcagcttgaatcaggacattcctgcctttaaagagcacctcagggacttcctggtc
caaatcaaggagtttgcgggcgaggactccacggatctgttcctggaggagagggaagcg
gctctgcgtcaggctcaggaggagaaacacaagctccagatgtctgtcccaggaatcctc
aaccctcacgagctcccggaggaaatgtgtgaatga
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