Puntigrus tetrazona (Sumatra barb): 122351153
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Entry
122351153 CDS
T08985
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122351153 (scn1laa)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122351153 (scn1laa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Zip
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
122351153
NCBI-ProteinID:
XP_043103972
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All DBs
Position
9:24040852..24086734
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AA seq
1963 aa
AA seq
DB search
MAHSFTPPGPKSFRKFTRESLKAIESRIAEENARKSKDKQERNKDNECGKKPNSGLEAGK
NLPFIYGDVPRGLVSTPLEDLDQFYSNQTTFIVVNRKKTITRFNAAPALYIFSPFNLLRR
ISIKILVHSLFSMFIMFTILTNCAFMTFSQPPDWSKNVEYAFTGIYTFEALTKIIARGFC
VGQFTFLRDPWNWLDFVVIVMAYVTEFVDLGSVSALRAFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTLFCLSVFALVGLQLFMGILKNKCVILPSDYNLSVYMINKTEDCYE
LDFCKNYINNPSNHYIQTGKKDAMICGRSSDAGQCPENYVCIKAGFNPDYGYTSFDSFGW
AFLSLFRLMTQDYWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQN
QATIDEALKKEEEFNAMLQQLIRQEEEAQAAANASKCDGLSGEKTDSSSDASKLSSKSAK
ERRNHRKKRKRQGEGKEEEDSNREGFDRKPSFRLIADGKIRLSRERTYTSPHQSPLSIHG
SILTPRRDSKGSVFSFRDRVHSENNYADDEQSVCEETGSRRNSLFIPSRSERLYSTLSKS
SLTPRILLPSNGKARYVVDSNGMVIVSGGASSPNSPSGLLTPEVSRKRATFDDTCFDTDE
EFRHRCDSRSFSRAFLYDQSARQRALSVASVSNNTIDPSEVWKQKCVECWFEFAENYLIW
DCSPTWVKIKKIVHMVIMDPFADLFITICIVINTVFMAMEYHPMDESYIAMLTTANVVFI
AIFTAEMILKIIALDPYMYFQEGWNIFDSIIVTLSLLELCSTGISFLRPFRLLRVFKLAK
SWPTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKIDDDCILPR
WHMNDFFHSFLIVFRVLCGEWIETMWDCMEVSGQTLCLIVFMMVMVIGNLVVLNLFLALL
LSSFSADNLAVPGEDAEKNNLQIAVGRIKKGFAVVKACLHNFFWSGCIRKRKQKKKTVDG
NIILRNCKGINDSSNHTTLELGKTTGCTGMDSDTEDFISNPSLTVSVPIAVEESDFECLN
TEDFSSLSSDLDDKEKLSDVDPSSSEGSTVDLRHFGKDGEDALDSELEESMDPEACFTPG
CVTKFPCCQVDAEKGMWKKWWLLRQTCYNIVEHSWFETFIVFMILLSSGALAFEDIYLES
RKTAKTILEFADKVFTYIFILEMLLKWVAYGFAKYFTNLWCWLDFIIVDVSLISLVANAL
DYSELGAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIV
GVNYFAGKFYECINKTTEKRSLSPQIRNKSDCLNSDELEWRNVKINFDNVGNGYLALLQV
ATFKGWTHIMYAAVDSRGVDEQPEYEVNLYMYLYFVIFIILGAFFTLNLFIGVIIDNFNQ
QKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNKIQGFFFDLVTNQAFDIFIM
ALIWLNMVTMMVETEDQSKEMTKVLSWINLVFIVLFTSECLLKMVALRQYFFTIGWNVFD
FIVVILSIVGMFLAEVIKKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLP
ALFNIGLLLFLVMFIYAIFGMSNFAYVKKSNGIDDMFNFETFGNSMLCLFQITTSAGWDG
LLAPMLNTNGSTCDPNKTFPGSQAKGDCGNPPIGIFFFVSYIIICFLIVVNMYIAVILEN
FSVATEESAEPLSEDDFDRFYEVWEKFDPNATQFMDYDKLSDFANSLDPPLRLPKPNRLQ
LISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRGQMEDRFMASNPSKSSYEPITT
TLRRKHEDMSAAIIQRAFRNHMVRHSTKKVRNVHREKRQQNGKVPSKESVNNDKCDNNSA
SEISDATPSTSSPLSYDSLIQNATNKYKKDKHEKEVEDKGNSV
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcgtttactccaccaggaccgaaaagtttccgtaagttcacccgtgaatct
cttaaggccatcgagagccggatcgccgaggagaacgccaggaagtccaaggacaagcag
gagagaaataaagacaatgaatgcggaaagaaacccaacagtggcctggaggccgggaag
aatctgcccttcatatacggagacgttcccagaggactggtgtccacaccactggaggac
ctggaccagttctacagcaatcagacaacttttatagtagtgaacagaaaaaagacaatc
acccgtttcaacgccgctcctgccttgtatatcttcagtcccttcaaccttctaaggaga
atatcaattaagattttggtacattcgttgttcagcatgttcataatgttcactatactg
acaaactgcgctttcatgaccttctcgcaacctccagactggtccaagaacgtagagtac
gccttcactgggatatacacttttgaagcgcttacaaagatcattgcgagggggttctgt
gtcggacagttcacgttccttagagacccgtggaactggttggattttgtggttatagtc
atggcatatgtaacagagtttgtggatctgggtagtgtgtctgcgctgcgagcgttcaga
gtactccgagccctgaaaactatatcggtcatcccaggcctgaaaacaatcgttggagct
ctgatccagtcagtgaagaagctgtcagatgtgatgatcttgacccttttttgcctaagc
gtctttgctttggtcggactgcagctgttcatggggattctgaaaaacaaatgtgtgatc
ctgccatccgattacaacttatctgtttatatgattaacaagacagaggactgttacgaa
ctggacttctgtaagaactacattaacaatccgagtaatcattatatccaaacaggaaaa
aaagatgctatgatatgtggaagaagcagtgatgctgggcagtgtccagaaaattatgtc
tgtataaaagcaggtttcaatccagattatggttacacaagctttgattcctttggctgg
gccttcctttccttattcagattgatgactcaagactactgggagaatctttaccaacag
actcttcgggccgcaggaaaaacctacatgattttttttgtactggtcattttcttggga
tccttctaccttgtgaatctgatcctggctgtggttgccatggcatatgatgaacaaaat
caagctactattgatgaggctttgaagaaagaggaggagtttaacgccatgcttcagcag
cttataagacaggaagaggaagctcaggctgccgctaatgcatctaaatgtgatgggctg
agtggagaaaagacagactcttcctcggacgcctccaaactcagttctaaaagtgccaaa
gaaagacgcaaccacaggaaaaagagaaagcgtcagggggaaggcaaggaagaagaggat
tccaacagggagggatttgatagaaagcccagcttccgtcttatagctgatggaaaaatc
cgtctctcacgtgaaaggacttacacgtctccacatcagtcccccctgagtattcatggc
tcaatcctcaccccacgtcgagacagcaaaggtagcgtcttcagcttccgcgaccgcgtg
cattcagaaaacaactacgccgacgacgagcaaagcgtgtgcgaagagacgggcagcagg
agaaactctttgtttataccctctcgatccgagcgactttacagcactcttagcaaaagc
agtctgactccacgtatactgttgccgtctaatggaaaagcacggtacgtggtcgacagc
aacggtatggtgatagtgtcgggtggagcgtcttcgcccaactcgccctccgggttactg
acgccggaggtgtccagaaaaagagccacgtttgacgacacttgctttgacacagatgaa
gaatttcggcaccgatgtgattcaaggagcttttcgagggcttttctatatgaccagtcg
gcgagacagcgagctttgagcgtagcaagtgtcagcaacaacactattgacccgtcggag
gtctggaagcagaagtgtgtggagtgctggttcgagtttgcagagaattatctgatctgg
gattgcagtcccacatgggtgaagataaagaaaattgtccacatggttataatggacccc
ttcgcagatctgttcatcacgatttgcattgtaataaacacagtattcatggccatggag
tatcaccccatggacgagtcgtacattgccatgcttacaaccgccaatgtggttttcata
gccatctttacagcagagatgatattgaagatcattgcgttggatccctatatgtacttt
caggaaggctggaatatctttgacagcatcatagttacactgagtcttctggaactttgt
tcaactggaatcagttttcttaggccattcagactgctgagagtcttcaaactagctaag
tcctggccgactctgaacatgctgatcaagatcattggcaactcgctaggtgccttgagc
aacctgacgcttgttctagccatcatcgtcttcatcttcgcggtggtgggcatgcagctg
tttgggaagaactacaaagactgtgtatgtaagattgatgatgattgcattcttcctcgc
tggcacatgaacgatttcttccactcgttcctgatcgtcttcagggtgctatgtggagag
tggatagagaccatgtgggactgcatggaagtgtcaggacagaccttgtgcttgattgtg
ttcatgatggtcatggtgatcgggaatctagtggttttgaacctgttcctcgctctgctg
ctcagctcgttcagtgcagacaacctcgcggtccccggagaagatgctgaaaagaacaac
ctgcagatagcggttggtcgaatcaagaagggtttcgctgtagttaaggcctgccttcac
aatttcttctggagtggttgtataagaaagaggaagcagaaaaagaaaaccgtagatggg
aacataatcttgaggaactgcaagggaataaatgatagctccaaccacaccacactagaa
ctgggtaaaaccactggatgcacgggcatggatagtgacacagaagactttatcagcaac
ccaagcttgacagtcagtgtcccgattgctgtcgaggagtctgactttgagtgcctcaac
actgaggatttcagtagcctttcttcagacctagacgataaagagaagctgtccgacgtg
gatcccagctcttctgagggcagcaccgtggacctcagacacttcggtaaagatggagaa
gatgctttggactctgaactcgaggaatccatggatccagaagcctgtttcacaccaggc
tgtgtcacaaagttcccgtgctgccaggtggacgctgaaaagggcatgtggaagaaatgg
tggctgctgagacagacgtgctataacatagtggagcacagctggtttgagaccttcatt
gtcttcatgattctgcttagcagtggcgctctggcatttgaggacatttaccttgaatca
aggaaaaccgcgaagaccatactggaattcgctgataaagttttcacctacatcttcatt
cttgagatgctgctgaaatgggtcgcgtatggtttcgccaaatacttcaccaatctctgg
tgctggctggatttcattatcgttgatgtctctctgatcagcctggtggccaacgccctg
gattattcagagctgggcgccattaaatctctccgaaccctgagagcctttcgaccgctc
cgagctctctcacgctttgagggaatgagggtggttgtgaacgctcttctgggagccatc
ccctccatcatgaacgtcctgctggtctgcctcatcttctggctcatttttagcatcgtg
ggtgtcaactactttgcgggaaagttttacgaatgtataaacaaaaccacagaaaagcga
tcgctttccccacaaatccgtaataaatcggattgtctaaactccgatgaactcgagtgg
agaaatgtgaagattaactttgacaatgtaggaaatggatacctggccctgctacaagtg
gccacttttaaagggtggacgcacattatgtatgcagcggtagactctcgcggtgtagat
gaacagccagagtatgaggtgaatctgtatatgtacctctattttgtcatcttcatcatc
cttggggcttttttcacattaaatctcttcattggcgtcatcattgacaacttcaatcag
cagaagaaaaagtttggaggtcaggatattttcatgacagaagagcagaagaaatactac
aatgctatgaaaaagcttggctcaaagaaacctcaaaaacccatcccaaggccaaaaaac
aagattcaaggattcttctttgacctcgtaaccaatcaggcctttgacattttcattatg
gcccttatctggctaaatatggtcactatgatggtggagacggaagatcagtccaaagaa
atgaccaaagtgctgtcctggatcaatcttgttttcattgtgctcttcaccagtgaatgt
ctgctgaagatggtcgcgttacggcagtacttcttcaccatcggctggaatgtattcgac
tttatcgttgtcatcctgtctatagttggcatgttcctggcagaagtcattaaaaagtac
ttcgtctcgcccaccttgtttcgcgtcattcgcctcgcccggatcggccgtgtgttacga
ctaatccgaggcgccaagggaatacgaacccttctgtttgcgttgatgatgtcacttcct
gcccttttcaacatcggacttcttctcttccttgtcatgttcatctatgccatcttcggc
atgtccaacttcgcctacgtcaaaaagtcgaatggcatcgacgacatgttcaacttcgag
acgtttggcaacagcatgttgtgtttgtttcagatcaccacctcggcaggctgggacggc
ctgctggcacccatgctaaataccaacggatccacttgcgacccgaataaaaccttcccc
ggcagccaggccaaaggcgactgcgggaaccctcccatcgggattttcttcttcgtcagc
tacatcatcatatgcttcctgatcgtggtgaacatgtacatcgccgtcatcctggagaac
ttcagcgtggccaccgaggaaagcgcagagcctctgagcgaagatgacttcgataggttt
tacgaggtttgggagaagtttgaccccaacgccacgcagttcatggattacgacaagttg
tcggacttcgccaattctctggatccgcccctgcgcttacccaagcccaaccgcctgcag
ctgatctccatggatctgccgatggtgagcggcgaacgcatccactgcctggatatcttg
ttcgcgttcaccaaacgggttctcggggaaggcggcgagatggacatccttcgcgggcaa
atggaagaccgcttcatggcctccaacccctcaaagtcctcttacgagcccatcaccaca
accctgcgcaggaagcatgaagacatgtctgctgcaatcatccagagagccttcaggaac
cacatggtccgacatagtacaaagaaggtccgtaatgtccacagagagaaaaggcagcaa
aacgggaaggtcccgagcaaagagtctgttaacaatgacaagtgcgataataacagcgct
tcggaaatctcggacgcgactccctccacgtcctctccgctgtcgtatgacagcttgatt
cagaacgccacaaacaaatacaagaaggacaaacatgagaaggaagtggaagacaaaggt
aatagcgtttag
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