Puntigrus tetrazona (Sumatra barb): 122355437
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Entry
122355437 CDS
T08985
Symbol
prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00310
Lysine degradation
ptet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122355437 (prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122355437 (prdm9)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122355437 (prdm9)
Enzymes [BR:
ptet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
122355437 (prdm9)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122355437 (prdm9)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122355437 (prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122355437 (prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_3rep
Zn-ribbon_8
zf-LYAR
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
122355437
NCBI-ProteinID:
XP_043109640
LinkDB
All DBs
Position
12:4082690..4087603
Genome browser
AA seq
824 aa
AA seq
DB search
MMEEQEDSMFSDQHFYCEMCHQHFIDLCEVHGPPLFTCDSPTSMGIPQRALLTLPQGLVI
GRSSISHAGLGVFNQGQTVPLGMHFGPFDGEVTSEEKALDSAFSWVIYRGNNQYTYIDAE
RDTQSNWMKFVVCSRSETEQNLVAFQQNGRILFRCCRPISPGQEFRVWYAEEYAQELGII
WDKIWDKKIISQGPTEERAPQDCLCSYCHYSFPTIFYLRVHVKRSHPDEYAHFMQTQPLE
SVDIDHCLLASDAAPPTHIQPMIESCRVQTSSPNGQSSHQSEKSDCTDLSDTCSNGLSDQ
ANSVAEVLGEMNKCGECGRNFLRSCHLKRHQRTIHSKEKPYCCSHCRKCFSQATGLKRHQ
QTHQGEEKREKVADRTSDVYPCTKCSFSFVAKSNLYQHLKRHHHREYLRLVESGSLTPET
EGETGTNYDKHDPNYEPSTRAKRPVKNTLRGRSHPKKVSVGRPRGRPPKNKPAAQVEVLI
CTECEQRFSDLETLKSHQCAGRDTNKIEEPQEGVDSQNVCGECLRGFSNFDLLKAHECIE
QGDGSYCCSHCNLYFNRLCNLRRHERTIHSKEKPYCCTLCLKSFTQSSGLKRHQQSHSRR
KGHRQSSALVDASIFPCAYCPFSFTDERYLYKHIRRHHPEMSVKYLSFQEGGVLSVEKPH
SCSQCCKSFSTIKGFKNHSCFKQGEKVYLCPDCGKAFSWFNSLKQHQRIHTGEKPYTCQQ
CGKSFVHSGQLNVHLRTHTGEKPFLCSQCGESFRQSGDLRRHEQKHSGVRPCQCPDCGKS
FSRPQSLKAHQQLHNGTKLFPCTQCGKSFTRRYHLTRHHQKMHS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaacaggaggatagcatgtttagtgaccaacatttctattgtgagatgtgt
caccagcacttcattgacctgtgtgaggttcatggtccaccattattcacatgtgactct
ccaacatctatgggcattcctcagagagctctgctgacgctgccgcaaggcttggttata
ggtcgatcgagcatctctcatgcaggtcttggggtttttaaccaaggccagactgtgcca
ctggggatgcatttcggaccttttgatggagaggtgacctcagaggaaaaggcattagat
agtgccttctcttgggtaatttacagaggcaataatcagtatacttacatagatgcagaa
agagacactcaatctaactggatgaaatttgtggtgtgctcgaggagtgagacagagcaa
aatcttgttgcattccagcaaaacggacgtattctgttccgttgttgtcgccctattagc
ccagggcaggaatttagagtttggtatgctgaagaatatgctcaagaacttggcatcatc
tgggataagatctgggataagaaaataatttctcaaggtccaactgaagaacgggcacct
caggactgtctatgttcttattgccattactccttcccaacaattttttatctgcgtgtt
catgtgaagcgctcacatcctgatgagtatgcacactttatgcagacacagccgttagag
tctgtagacatagaccattgcctcctggcatctgatgcagctccgccaacccatatacaa
ccaatgatagaaagctgtcgggttcaaacttcaagcccaaatggacaatccagccatcag
tcggaaaagtcagactgcactgatttgtctgatacatgtagtaatggtttaagtgaccag
gcaaactctgttgctgaggtcttaggtgaaatgaataaatgtggtgagtgtggtcgtaac
tttttgagatcttgtcatctgaagagacatcagcgcactattcactccaaagagaagcca
tattgctgcagccattgtaggaagtgctttagtcaagcaacagggctgaaaagacaccaa
caaacccaccagggggaggaaaagagagagaaagttgctgacagaacttctgatgtatac
ccttgcacaaagtgctctttctcttttgtggccaaatccaatttgtatcaacatctgaaa
cgccatcaccacagagagtacctcaggttagttgagagcggctcgctcactccagagact
gagggtgaaacgggaacgaattacgacaagcatgacccaaattatgaaccttctactcga
gcgaagaggcctgtgaagaacactttgagaggcaggagtcaccctaaaaaagtatctgtt
ggccgaccaagaggacgaccacctaaaaacaagcctgctgctcaggttgaagtgcttatc
tgcacagagtgtgaacaaaggttctctgatttggagacacttaaatctcaccaatgtgcg
ggacgggacactaataagatagaggaacctcaggaaggagtagattctcagaatgtctgc
ggtgaatgcctgagaggtttcagtaattttgatcttctcaaagcccatgagtgcattgag
cagggagacggatcttactgttgctctcactgcaacctttacttcaaccgtttgtgtaac
cttcgtcgccatgagcgcaccatccactccaaggaaaagccctactgctgcaccttgtgc
ctcaagtccttcacccagtcttctggcttgaagcgtcaccaacagagccactcgcgccgc
aaaggtcaccgtcagagctcggcccttgttgatgccagcatctttccctgcgcatactgc
cccttctctttcaccgatgagcgctatctttacaaacacatccgccggcaccatccagag
atgagcgttaaatatctgagtttccaagaagggggtgttttgtctgttgaaaagcctcac
agctgcagccagtgttgcaagagctttagcacaatcaagggcttcaagaaccacagctgc
ttcaagcagggggagaaggtgtatctgtgcccagattgtggaaaggcattcagttggttt
aatagcctcaagcaacaccagcgcatacacacaggagagaagccttacacgtgtcagcag
tgcggaaagagttttgtccactccggacaactgaatgtgcacctccgcacacacacgggt
gaaaaacctttcctgtgttcacaatgtggcgaaagcttcaggcagtcaggagatttgagg
agacatgagcagaagcattcaggcgtccgcccatgccagtgccccgattgtggaaaaagc
tttagtcggccacaaagtctcaaagctcaccaacagcttcataatggcaccaaacttttc
ccatgcactcagtgtggaaaaagctttactcgtagataccatctcacccgtcatcaccag
aaaatgcactcctga
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