Puntigrus tetrazona (Sumatra barb): 122356125
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Entry
122356125 CDS
T08985
Symbol
trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog-B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122356125 (trmt2b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
122356125 (trmt2b)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122356125 (trmt2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Ubie_methyltran
MTS
Methyltransf_4
PrmA
Methyltransf_11
Methyltransf_15
Cons_hypoth95
Methyltransf_32
Methyltransf_12
Methyltransf_23
NodS
GBP_PSP
SBDS_domain_II
Motif
Other DBs
NCBI-GeneID:
122356125
NCBI-ProteinID:
XP_043110538
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All DBs
Position
13:complement(10913050..10914756)
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AA seq
474 aa
AA seq
DB search
MRVRLSWLLLKRTVVIPKICFSYSVASRRAANIDSRPVKARKARRPQLPADWHTLSWEER
LADSVTPLWRMSYEQQLQWKQEQQHRILLEMTKQLTGDLKHSFSTDLSFPLLPIVASPVI
DGYRNKSTFSVNIGVDGNPKTVGFYIGNSKAGNIVCVHGDHLPNIPSKHSMVARHYEDFI
RLSPLRPCILFHDGGHWREITIRTNSASHTMAIVYFHPQTLTPEDIAVHKAALVEYFTQG
PGAVCQLDSLYFQETTMTRCSHEQSPYRLLHGRPHIFEEVLGLKFRISADSFFQVNRRAA
EALYKTVAELNGERVGGTLLDVCCGTGAIGISLSPQTERVIGIELIEQAVEDAKFNAALN
GVHNCEFLSGKAEAVLPDLLASLNSDGGLTAVVNPSRAGLHYRVVRALRNHTAIRRLVYI
SCKPYGEAMRNFRDLCSTGYKRKTTGDAFKPAMAVPVDLFPHTTHCELVLVFER
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtacgcttatcgtggcttctgctgaaacgaacagtcgttataccaaaaatatgc
ttcagctattctgtagcaagccgccgtgccgccaatattgactcgaggcctgtaaaggca
agaaaggcacggagaccccaactccctgctgactggcatactctctcctgggaagagaga
ctggctgattctgtgactcctctgtggagaatgagttacgagcagcagcttcagtggaaa
caagagcagcagcacaggatcttacttgagatgacaaagcaactaactggggatttaaag
cactctttttcaactgacttaagtttccccctgcttcccatagtagcatcaccagtgatt
gatggataccgcaacaaatcaactttctctgtcaacattggggtagacggcaatccaaaa
actgttggattttatatcggtaatagtaaagcaggcaacatcgtctgtgtccacggtgac
catctcccgaacataccttcgaaacacagcatggttgcaaggcactatgaagattttata
cgcctctcgccactcagaccgtgcattttatttcacgacggtggtcactggagagaaatt
acgataaggacaaattctgccagtcacacgatggccatagtttacttccacccccaaacc
ctaacccctgaggacatagccgtccataaagctgctctggtggagtacttcacgcaaggt
cccggagcggtttgtcagctggattccctgtacttccaggagaccacaatgacccgttgc
agtcatgaacaatccccctatcggcttctgcacggacggcctcatatcttcgaagaggtg
cttggcttgaagttccgcatttctgccgattcgttcttccaggtgaatcggagggcggcg
gaggctttgtacaaaaccgtcgcggagctgaacggggagcgcgtcgggggcaccctgctg
gatgtctgctgcggaactggagccattggcatctcgttatcaccgcagacggagagagtc
attggcattgagctcatcgagcaggcggtcgaggacgccaagtttaacgcagcgctaaac
ggagttcataattgtgaatttctctcaggcaaagcagaagctgtcctgccagatctgttg
gcctctttgaatagcgacggcgggctgacagccgtggtgaatccgtccagggctggccta
cattatcgagttgtcagagccttgaggaaccacacagccataaggaggcttgtctatata
tcgtgcaaaccttatggggaggcaatgaggaactttagagatctgtgcagtacaggctat
aagaggaagaccactggagacgccttcaaaccagccatggccgtccctgtggacctgttt
ccacacactactcactgtgaactagtgctagtgtttgagcgatag
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