Puntigrus tetrazona (Sumatra barb): 122360460
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Entry
122360460 CDS
T08985
Symbol
tpra
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122360460 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122360460 (tpra)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122360460 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Motif
Other DBs
NCBI-GeneID:
122360460
NCBI-ProteinID:
XP_043117020
LinkDB
All DBs
Position
2:complement(9681973..9702207)
Genome browser
AA seq
2356 aa
AA seq
DB search
MAALLQQALERAEINKLPKAIQNKLEKVLSEQQTEVDSLKSQHERYKADCEQQYFNLEKK
LAESQEQFLSQSKEHHSIKEENSRLAEELKKLKEIEEEQGDARESKPTRAKYEIEAENRE
LSRMLEKRSQEVENLSEELKRLNDKLVETNTIKMELQLKLDELQSSEVSIQYREKRMEQE
KELLQNQNTWLNSELKSKTDELYTISRDKGKEILELKCLLESKKEEVSRLQDQVNTVKNN
NDNMQKSTEDMMNKLKEAKDQRASMEEKYRNELNANLKLCNLYKNAAADSEAKNAELNRA
VEELNKLLKEAVEASKGTEKKLSELQNVRERAESDLHEKVGHLEKELENANTRLVDFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLENKRVHKVLDE
IVLEVETKAPILKRQREEYENMQKSMSSLCAKLEQAMKEVHRLQKETDEANKRALGLERD
KQRSERQLTDMSEQVRVLLVEVEEARGNQVVREDVSSAVSSSSEVQGSRQVAFRSVQELQ
QQNQNLLAQIRDLEEQRERDQNQAKTARQTELEQSLEKVQKELEQIKEQLNHQKQLADSA
TRQRDMYRILLQTAGVELPPHGSEAGSQSTTPSRPGAMATRSTPLRAAAAESVQAIQAKA
ALKQLNDSFTTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSSQLEFAFKRYEMLQE
NVNAFRRETEALREKNQKMTATHQRHEQIIHTMTQDLREANEKLAMAELRVENIRKEKDI
LKQVENRLTQEKESILTEQRGQSLLLTNLKSIQLTMERSETETKQRYNNQIQRLEKEIIQ
IKKKLEQEVEQRHALERNQDVQLLQAKKQLETQSTLHQKTKELLRTAEQQVTSMRQQLNN
NENQSTAPKQPVRTLPRVSAPGVPQQEVDELRARLQQAEEQNSDLKERLKNTTTNLEQYR
SVVLSLEESVNKEKQLAEQARTSTDTQLKSARELNQQLEARLVEAEKEKLELQEEKMKAV
ESVEERVKELKTSMTNMQTELQDALQRAAEAVTQEQRATQDSKLQAKLAAEAQNKYEREL
MLHAADVEALQAAKKQGQQSVQTTRQLEEKAQKAASELRQGRVDWEQQEKRLKEELSKEQ
KRAEELQKQNTMLHEQMENLSSKITASTQQQTTRESCLNISLNEEGKSHEQILDILRFVR
REKEIAETRLEVAEVETLRYKQRMDYLEGELKELQDSLNAEREKLQVATKTLAQQEDMMK
RVESMSALTETNKMLKNEKNRLEHELQQTQAKVRKLETDIKPLQDSNAELSEKSGMLQAE
KRLLEEDVKRLKTRTQQLLSQQKDSDQEETKKLHSEREAHIKRIQQLIEDTGKLKNELAR
SQASITTAQSQVQNLQDSLGKVTTERDNLKKELEVKTMDIQEKLKTITQVKKIGRRYKTQ
YEELKEQHDKMVAEAASKPAQEQEDRQASVQEIQNLKNSLSQTQNRTSELETQLDNIQKT
VQEREAEVKSLQEQLAQVQPELSRLRTELQEKNNLEEQLRQQIADKEEKTKKAFMGAKQK
INQLNSAKEQLAKENEELKQQREELEVRMSALKSQYEGRLSRQERELRELREQQERHGDQ
KDEAQEPGQSKVQEAQRSSDARQITLKPTPAADRGSASTSEPPTANIKPTPVAAAPSKPS
PIAGSKSTPRASIRPMITPAPVTTPTPTATVMPTTQVETQEALQSTEGPVEHVTVFGSTS
GTVRSTSPNIQTTQPILSLQQSQATAFVQPTQQQTSQEPATTMMEAVHSSQMERPSTSTA
VFGTVSATAGSSLPKRVREEEQESSTEVTDTTQDDPTHPPITKKLRIIRRVGLEDASGTE
ESNDAMGDSTGEVQQPPDASEEAYPVLGEGDEESLSQSVPMDQVSESQPSESQISGQDSS
EEYKHDVIVIETDSGTEEEEEEQEEPGQYEDDDAEDDDDDEDGEGGMAEAAEESNEGSGS
ADANEAYEGDEAEGDGAADPGIDNEESQEASDSIQKQADSQSGEASVSTLEAFPAEPVRE
QQPVPSTTTTSSSSSSSTTLGPRLPHSPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSR
RPSMSRAPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRF
GPPEDMMPQASSSHSDLSHLATHGGLGMYESPLFLPTHDEESGGRSVPTTPLQVAAPVTV
FTESHPSDVSETASQSVPMVSTSTAGLTAPGEAVPGDDGDDVFVGEAESEGTSSEACLEG
QPELESTQPTDDASLPSTSQEPTSSSADTSSSTGQAKPASRLFPQHQPPRRNQIIRRGGV
FSRGGRGRGLNRGTPI
NT seq
7071 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaggcgctggagagagccgagatcaacaaactaccgaaagca
atccagaacaagctcgagaaagttctgtcagagcagcagacggaggtagactctctgaaa
tcccagcacgagcgatataaagcagactgcgagcaacagtactttaatcttgaaaagaag
ctagctgagagtcaggagcagttcttgtcccaaagtaaagagcatcacagtattaaggaa
gaaaacagccgtcttgccgaggaacttaagaagctaaaagagatagaggaagaacagggg
gacgcaagagagagtaagccaacaagagccaaatatgaaatcgaggcagaaaacagagag
ctctcacggatgcttgagaaacgatctcaagaagtggaaaacctcagcgaggaacttaaa
cgtctcaatgacaaacttgtggagaccaacacaatcaagatggagctccagcttaaatta
gatgaacttcagtcatcagaggtttccattcagtatcgtgagaagcgaatggaacaagaa
aaggagctccttcagaaccagaacacatggctgaattcagagctgaagagtaagacagac
gagctgtacacgatatccagagacaagggcaaagagatcctggagctcaagtgcttatta
gagagcaagaaggaggaggtatctagacttcaggaccaagtgaacacggtcaagaataac
aatgacaacatgcagaagagtactgaagatatgatgaacaagctgaaagaggctaaagac
cagcgggcctccatggaggaaaagtatcgcaatgagctgaatgctaaccttaaactctgt
aatttgtacaagaatgcagcagcagactctgaagctaagaacgctgaattgaacagagca
gttgaagagctcaacaaactgttgaaggaggcagtggaagccagtaaaggtacagagaag
aagctgtcagagctgcagaatgtgagggagagagcagagtctgatctacatgaaaaggtt
gggcatctagagaaggagctggagaacgccaatacacggcttgtagactttaagcggaga
ggcgttccagctctcacagaagaggagctgacaaacctctctccaactgcagctgcagtg
gccaagattgttaagccaggcatgaagctaatggagctatataatgcctttgtggaggcg
caagaccaactgcatctggagaagctggagaacaagcgtgtgcacaaggtcctggatgag
attgttttggaggtggagaccaaagctcccatcttgaaacgccagagggaagaatatgaa
aacatgcaaaagtccatgagcagcctttgtgccaagctggagcaagctatgaaggaggtc
catcggctgcagaaggagacggatgaagccaataagagagctttagggctggagagagat
aagcagagatcagaaagacagttaacagacatgtctgaacaggtacgcgtgctgttggtg
gaggtggaggaagcacgtggtaatcaggtggtgcgtgaggacgtgagctcagctgtgagt
agcagctctgaggtccagggctcacggcaggtggctttccgcagcgtccaagaacttcag
cagcagaaccagaacctgctggcccagatcagagatctggaagagcagagagagagggac
cagaaccaggctaagactgccaggcaaacagagttggagcagagtctagagaaggttcag
aaggagctggaacagatcaaggaacagctaaaccatcagaaacagctggctgactctgcc
acccgtcaacgagacatgtaccgtatcctgttgcagacagccggagttgagcttccacca
catggttcagaggctgggtctcaatccaccactcccagcaggccaggagctatggccacc
agatcaacacctctgagggctgcagctgcagaatctgtccaggcaattcaggctaaagca
gctcttaaacagcttaatgattcgtttacaacatataaaaaggagaaggcagaaaacgac
aagcttctgaatgaacagattgagaggctccgtggccaagtgtctgatctgctctcacag
aaggctaaactttcatcacagctggagtttgccttcaaacggtatgagatgcttcaggag
aatgtgaatgcctttcgacgagagactgaagcactccgtgagaagaatcagaagatgact
gccactcatcagagacacgagcaaatcattcacacaatgactcaagatctaagggaagcc
aatgagaaactagccatggccgagttgcgtgttgagaacattcgtaaggaaaaagacatt
ttgaagcaggtggagaacagactgacccaggagaaagagtccatcctgactgagcagcgc
ggccagagcctcctgcttaccaacctcaagtcaattcagcttaccatggagcgctctgag
actgagaccaaacagcgctacaacaaccagattcaacgtttggagaaagagatcattcag
attaagaagaaactagagcaggaagtggaacagagacatgcactggaacgcaaccaagat
gttcagctgctgcaggctaagaagcagttggagacacagtcaacactacatcagaagact
aaagagctgctaagaactgctgaacagcaggttacctctatgagacaacaactgaacaac
aacgaaaaccagagcacagcgcctaaacagcctgttaggacgttacccagagtttcagct
cctggtgttcctcaacaagaagtggatgagctccgagcacgtctacagcaggccgaagaa
caaaactctgacctgaaggagcgtttgaagaacaccaccaccaacctagagcagtacaga
tcagtggtgctcagcttggaggagtctgtgaacaaagagaagcagttggctgagcaggca
cgcacctccactgacacccagctgaagtcagcacgggagttgaaccagcagctggaagct
cggctggtagaggcagaaaaggaaaagctggagctccaggaggagaagatgaaagctgtg
gagagcgttgaagaacgggtgaaggaactgaaaacgagcatgaccaacatgcagacagag
ttacaggatgccctccagagagctgctgaagcggtgactcaggaacagagagcgacacaa
gatagcaaattacaggctaagctggctgcagaggctcagaataaatatgagcgagagctc
atgctgcatgctgctgatgtggaagccttacaggctgccaagaaacagggacagcagtca
gtacagaccacgaggcagcttgaagagaaagctcagaaagctgcatctgagctgcgtcag
ggccgcgttgactgggaacagcaagaaaagaggctaaaggaagaactttctaaagagcaa
aagagagctgaggagctccagaagcagaacaccatgctccatgagcagatggagaacctg
agcagcaagataaccgcctccacccaacagcagaccactagagagagctgtctgaacatc
tctttgaacgaggaaggcaaatctcatgaacagatcctggacattctcaggtttgtacgg
cgggagaaggagatagcagagacccggctggaagtggctgaggttgagaccctacgctat
aaacagcgcatggattaccttgagggagaattgaaggaactgcaggacagcctgaatgca
gagagagaaaaactacaggttgcaacgaagactttggcacagcaggaagacatgatgaaa
cgggtggagagtatgagtgctctaactgagaccaacaagatgttgaagaatgagaagaac
agactggagcatgaactgcaacagactcaagcaaaggtgcgcaaactggaaactgacatc
aagcccctgcaggactccaatgctgagctgagtgagaagagtggcatgttacaggctgag
aagagactcctcgaggaggacgtcaagcgcttgaagactcgaacacagcaactgcttagt
cagcagaaggacagcgatcaggaggaaactaagaagcttcattctgagagggaggcccat
atcaaacgcatccagcagctcatagaggacacgggcaaactcaagaatgagttggccagg
agccaagcttcaatcaccacagctcagagtcaggtgcagaacctgcaggatagccttggg
aaggtcaccactgaaagggacaatctgaagaaggagctggaggtaaagaccatggacatc
caggaaaaactcaaaaccatcacacaagtcaagaagattggccgtcgctacaaaacccag
tacgaagagctcaaagaacagcatgataagatggtggcagaggctgcttctaagccagca
caggagcaggaagaccgtcaggcctcagtgcaggagattcaaaacctgaagaactcactg
agtcagacacagaacagaacctcagaactggaaactcagctggacaacattcagaagacg
gtgcaggagcgtgaagctgaagtgaagagcctgcaggagcagctcgcacaggtgcagccg
gagctcagccgtctgagaacagagctacaggagaagaataacctggaggagcagctccgc
cagcagatcgctgataaagaggagaagaccaagaaagccttcatgggtgccaagcagaag
atcaaccagctcaacagtgcgaaggagcagttagcgaaagaaaacgaggagctgaagcag
cagagagaggagttggaggtgaggatgagtgcgctcaagtcccagtatgaaggtcggttg
agccgacaggagagagagctgagggagctccgtgagcaacaggagagacacggagatcag
aaagatgaagctcaggagccaggccagagcaaggttcaggaggcacagaggtcatcagat
gctcgccagatcactctcaaacccacacctgctgccgacagaggaagtgccagcacatct
gagccacccacagctaacatcaagcccacgccagttgctgccgcccccagcaagccttca
ccaatcgcagggagcaagtccacccctagggcaagcatccggccaatgattacacccgct
cccgtgactacgcccacacccacagccaccgtcatgcccacaacacaggtggaaacgcag
gaagctctccagtccacagagggtcccgtggagcacgtgacggtcttcggcagcaccagc
ggcacagtgcgctccaccagccctaacatacagaccacacagccaatcctcagtctgcag
cagagccaagccaccgccttcgtccagcccactcagcagcagaccagtcaggaaccagca
accactatgatggaggcagttcatagctcacagatggagaggccgtccacttccactgct
gtgtttggtacagtgtcagcaacagcaggctcatctttgcctaagcgagtgcgagaggaa
gagcaggagagctccaccgaggtgacggacaccacacaggatgaccccacacacccaccc
atcactaagaagctccgcatcataagaagagtgggcctggaggatgcttctggcactgag
gagagtaacgatgctatgggtgactctacaggagaagtccagcagcctcctgatgccagt
gaggaagcgtatcccgtgttaggagagggagatgaagaatctttgtctcagtctgtcccg
atggatcaggtgagcgagtcccaaccctcagagtctcaaattagcggacaggactcatcc
gaggagtacaagcatgatgtcatagtcatcgagaccgatagcggcacggaggaggaagag
gaggagcaggaggagcctggacagtacgaagacgatgatgcagaagatgatgatgatgac
gaagatggtgaaggagggatggcggaagcagcggaggagagtaatgaaggcagcgggagt
gcagatgccaatgaggcctacgagggagacgaggcagagggcgatggagcggccgatcca
ggcattgacaatgaagagagtcaagaagcatctgattccatccagaagcaagcagactct
cagagtggtgaagctagtgtcagcaccctggaggccttccccgctgagcctgtgagagag
caacagccagtccccagcaccaccaccacctcctcctcctcctcctcctccaccaccctg
ggcccacgtcttccccattccccacggagaccacatcacaccccacccccacgcctcaac
atccaccccgtccctgagctcggaccccctatcatgcagaggcagtcaggacagagcaga
cgaccctcgatgagccgtgcaccgcagctcacgcctggaatcggaagcatgcaacacttc
tttgacgacgacgacagaatggtccccagcactcccaccctcgtcgtaccacaccgtaca
gatggcttcgcagaggccattcattcccctcaggtggccggagttcctcgcttccgtttc
ggtcctcctgaggatatgatgccccaggccagctcctctcactctgacttgagccatctg
gccacacacggaggattgggcatgtatgaaagtcctctgttcctgcccactcatgatgaa
gagtctggaggcaggagtgtccccaccactcctctacaagtggctgctccagtgaccgtt
ttcactgaaagccacccctctgatgtgtcagagacagcctctcagtcggttcccatggtc
agcacgtccaccgccggtctgaccgcaccaggagaagctgtcccaggagacgatggagat
gacgtctttgtgggggaggctgagagtgaagggacgagcagtgaagcatgtctggaggga
caaccggagctggaatccacgcagccgaccgatgatgccagtctgccctccactagtcaa
gagcccacgtccagctccgcagacacgagcagcagcacaggtcaggccaaacccgcaagc
cggctctttcctcagcaccagccgccccggaggaaccagatcatcaggagaggtggtgtt
ttctctcgcggaggtcggggtcgaggactcaacagaggcactcctatctaa
DBGET
integrated database retrieval system
