Panthera tigris altaica (Amur tiger): 102970727
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Entry
102970727 CDS
T02988
Symbol
SETDB1
Name
(RefSeq) SET domain bifurcated 1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ptg
Panthera tigris altaica (Amur tiger)
Pathway
ptg00310
Lysine degradation
ptg01100
Metabolic pathways
ptg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ptg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102970727 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102970727 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptg03036
]
102970727 (SETDB1)
Enzymes [BR:
ptg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102970727 (SETDB1)
Chromosome and associated proteins [BR:
ptg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102970727 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102970727 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
DUF4537
53-BP1_Tudor
Chromo
Motif
Other DBs
NCBI-GeneID:
102970727
NCBI-ProteinID:
XP_007088148
LinkDB
All DBs
Position
Un
AA seq
1288 aa
AA seq
DB search
MSSIPGCIGLGAAAAAVESDEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGPLRTR
PNMGAVRSKGPVVQYTQDLTDPPQPPAPPAPPAPPAPPAPPAPPVSPQAGDNDSLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKPGSNQTYRSPLGPTASAPAAPP
APPVPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSAQYRGKNPLLVP
LLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPY
VLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGP
EFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNK
RCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFAD
KEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESND
DSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPSHIPVPPAI
PGGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTNEGGEGRAGGGRGEAEK
ASTSGLGFKDEGDLKQAKKEDPDDRNKMSLITESSRNYGYNPSPMKLEGLRRPPSKTSMH
QSRRLMASAQSNADDVLTLSSSTESEGESGTSRKPTTGQTSATAVDSDDIQTISSGSEAD
DFEDKKNMSGPAKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatccctgggtgcattggtttgggtgcagccgcagctgcggtggagtctgat
gagatcgcagagctgcaacaagcagtggttgaggagctgggtatctcaatggaggaactg
aggcagttcattgatgaagaactggagaagatggactgtgtacagcagcgaaagaagcaa
ctagcagagttggagacgtgggtaatacagaaggaatctgaggtggcccatgttgatcag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacaataccgggacagtagctctgaggatgaagcctcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaacacccaaagaccagaagctccgtgaggctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaaaaagagcagctcccaagatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctaatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggtcggaccaggaaagaagtacaaggtgaaatttgacaacaaagggaagagt
ctactgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgagtggtggccaagtacaaggatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggg
tacgcttcctatgtcacacaatctgaactgtatcccatttgccggccactgaaaaagaca
tgggaggacatagaagacatctcctgccgagacttcatagaggagtacatcacagcctac
cccaaccgccctatggtgctactcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgggtcgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgcgaatggatctatcgaggctccacacggctagagcccatgttcagc
atgaagacctcctcagcctccgcactagagaagaagcaagggggaccgctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtggtccagtacacccaggatctgacc
gaccccccccagccgccagcccctcctgctccccctgccccacccgctccccctgccccc
cctgctccccctgtgtccccgcaggcaggtgacaatgacagcttggaaagtcagcttgcc
caatctcggaagcaggtagccaaaaagagcacatccttccgaccaggatctgtgggctct
ggtcattcctcccctacatctcctgcactcagtgaaaatgttcctgctgggaaacctggg
agcaaccagacatatagatcacctttaggcccaacagcctctgccccagcagcgccccca
gcacctcccgtgcccccagccttccatggcatgttagaacgggccccagcggagccctcc
taccgtgcccccatggagaagctcttctatttacctcatgtgtgcagctatacgtgtctg
tctcgagttagacctatgagaagtgcacagtaccggggcaagaacccactgctggtcccg
ctgctctatgacttccggcggatgacagcccgtcgccgagttaaccgcaagatgggcttt
catgtgatctataagacaccctgtggcctctgccttcggacaatgcaggagattgaacgc
tatctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccatat
gttcttgtggaccgcaagtttcagccctataaacctttttactacattctggacatcacc
tatgggaaggaagatgtccccctatcctgtgtcaatgagattgacacaacccccccaccc
caggtggcctacagtaaggaacgaatcccgggcaagggtgttttcattaacacaggccca
gaatttctggtcggctgtgactgcaaggatgggtgccgtgacaagtccaagtgtgcctgt
caccagctaactatccaggccacagcctgtaccccgggcggccagatcaaccctaattct
ggctaccagtacaagagactagaagagtgtctgcccacaggagtttatgagtgtaacaaa
cgttgtaaatgtgacccaaacatgtgcacaaaccggttggtgcagcacgggctccaggtt
cggctacagctattcaagacgcagaacaagggctggggtattcgctgcttggatgacatt
gccaaaggatccttcgtctgtatttatgcaggcaagatcctgacagatgactttgcggac
aaggagggcctggagatgggtgatgagtactttgccaatctggaccatatcgagagtgtg
gagaacttcaaggaaggatatgagagtgatgccccctgttcgtccgacagcagcggggtg
gacttgaaggaccaggaagatggcaacagcggtacagaggatcccgaagagtccaatgac
gacagttccgatgataacttctgtaaagatgaggacttcagtaccagctctgtgtggcgc
agctatgctacccggaggcagacccggggccaaaaggaaaacggactgtctgagacggct
tccaaggactcccgccccccagaccttgggccctcccatattcctgtccctccagcgatc
cctgggggtggctgcaatccgccttcctctgaagagacacccaagaataaggtggcctca
tggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgatagccgttcatcc
ttcaagactaacgaaggtggggaaggccgggctgggggaggcagaggggaggctgagaag
gcctccacctcagggctgggcttcaaggatgagggagacctcaagcaggccaagaaagag
gaccccgatgaccgaaacaagatgtccttaatcactgaaagctctcgaaattatggttac
aatccttctcccatgaaacttgaaggacttcgccgcccacctagtaagactagtatgcat
cagagccgacgactcatggcctctgctcagtccaacgctgatgatgtcttaacactgtcc
agcagcacagaaagcgagggggaaagtgggaccagccggaagcccaccaccggccagact
tcagccacagcagtggacagcgatgatatccagaccatctcctctggctctgaagcagat
gactttgaggacaagaagaacatgtctggtccagcaaagcgccaggtggcagtaaaatca
acccggggctttgctcttaagtcaacccatgggattgccattaagtcaaccaacatggca
tccgtggaaaagggggagagcgcacctgtccgtaagaacacacgccagttctacgatggg
gaggagtcttgctacatcatcgacgccaagctcgaaggcaacctgggccgctacctcaat
cacagctgcagccccaacctgtttgtccagaatgtctttgtggacactcacgatcttcgc
ttcccctgggtggccttctttgccagcaagaggatccgggccgggactgagctgacttgg
gactacaactatgaggtgggcagtgtggaaggcaaggagctgctgtgctgctgcggggcc
attgaatgcagggggcggcttctgtag
DBGET
integrated database retrieval system
