KEGG   Phaeodactylum tricornutum: PHATRDRAFT_10160
Entry
PHATRDRAFT_10160  CDS       T01075                                 
Symbol
CDKD1
Name
(RefSeq) hypothetical protein
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03022  Basal transcription factors
pti03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PHATRDRAFT_10160 (CDKD1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHATRDRAFT_10160 (CDKD1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pti01001]
    PHATRDRAFT_10160 (CDKD1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pti03021]
    PHATRDRAFT_10160 (CDKD1)
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_10160 (CDKD1)
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_10160 (CDKD1)
Enzymes [BR:pti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     PHATRDRAFT_10160 (CDKD1)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     PHATRDRAFT_10160 (CDKD1)
Protein kinases [BR:pti01001]
 Serine/threonine kinases: CMGC group
  CDK family
   PHATRDRAFT_10160 (CDKD1)
Transcription machinery [BR:pti03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PHATRDRAFT_10160 (CDKD1)
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     PHATRDRAFT_10160 (CDKD1)
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PHATRDRAFT_10160 (CDKD1)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like ABC1 APH Kdo Haspin_kinase
Other DBs
NCBI-GeneID: 7197213
NCBI-ProteinID: XP_002177995
JGI: 10160
UniProt: B7FSJ7
LinkDB
Position
2:complement(739883..740797)
AA seq 304 aa
MENYKVLSALGQGTWGVVHKAEQKLSGRVVAIKKIKSERPEEGVNFTAVREIKLLREFRH
ENIVELVDCFTTPDQAVCLVYECAFTDLEKILGNKSISISLADTKQHLLSLLRAISACHD
RWILHRDLKPDNMLFLEDGTMKLADFGLARMHGTPKTRLSPQAITLWYKPPELLLGASEY
SSSADMWSVGCIFAELLLRRPFLQGQTDLSQLDTIFTVFGTPNETNWADFQTLPLCTRGL
EWDETTAIPFDEIFTAAPKDAISLLRSILVLDPNMRFTATQCLSHPYFSNDPVPTLKEKL
VLTA
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaaaattacaaagtcttatccgctctcgggcagggtacgtggggtgttgtgcacaag
gccgaacaaaaattaagcggtcgggttgtggcaataaaaaaaatcaagtctgaacggccg
gaagagggggtcaattttacggccgtccgggaaataaaactgttgcgcgagttcagacat
gaaaacatcgtcgagctggtggactgcttcactacacctgatcaagctgtgtgcttggta
tacgaatgcgcgttcactgatctggagaagatcctcggcaacaaatcaatatcaatttcg
ttggcggatacgaaacaacatttgttgagtttgctacgagccatttcagcttgtcatgat
cgatggatactgcatcgtgatctaaaacccgacaatatgctgttcttggaagacggcaca
atgaaattggcggattttgggctggcccgcatgcacgggacaccgaaaacgagattgtca
ccgcaagcaattacgctgtggtacaaacctcccgaattgctcttgggggcgtcggaatat
tcttcgtccgccgatatgtggagtgtgggttgtatctttgcggaattacttctgcggaga
ccattcctacagggacaaaccgatttatcccaattggatactatttttaccgtttttggg
acacccaacgaaacaaattgggccgactttcaaacattaccattgtgcacccgagggttg
gaatgggacgaaacaacagctataccctttgacgaaatctttaccgcggcacccaaggac
gctatatcgctgctgcgatcgattctcgttctggatcccaatatgcgcttcacagcaacg
cagtgtctcagccatccctacttttccaacgatcccgtaccgactttgaaggaaaagcta
gttttaaccgcatag

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