Phaeodactylum tricornutum: PHATRDRAFT_24772
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Entry
PHATRDRAFT_24772 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01702
3-isopropylmalate dehydratase [EC:
4.2.1.33
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00290
Valine, leucine and isoleucine biosynthesis
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01210
2-Oxocarboxylic acid metabolism
pti01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PHATRDRAFT_24772
Enzymes [BR:
pti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PHATRDRAFT_24772
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
7196176
NCBI-ProteinID:
XP_002177302
JGI:
24772
UniProt:
B7FPZ8
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Position
1:complement(1492602..1495320)
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AA seq
801 aa
AA seq
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MRFSGSLPFCLLLANTVAFVPNARNAAFRPVPSSLFAAGPRTLYDKIWDDHMVDDDGSSF
LIYVDRHLVHEVTSPQAFEGLRLAKRGVRRPDCTLVTVDHNVPTADRTGLIDVATFIEET
ASRTQVMTLEQNIKDFGLKYFSFADERQGIVHIIGPEQGFTLPGCVTVCGDSHTATHGAF
GALAFGIGTSEVEHVLATQTLAQTKTKNMLIRVDGELGDGVTSKDIILHIIGVIGTGGGT
GYTIEFGGTAVQSCSMEARMSISNMAIEAGARAGIIAPDDTTYEYLKGRPMCPSGEEWEK
AVKYWDSIRSDEGAVYDKTIVIDSKDIAPTVTWGTSPQDVAPITGNVPMIQAEGHDASRQ
NAIKRSLQYIGLEEGQPLEGVPIEKVFIGSCTNGRIEDIRNVAAIAMGRKVAEGVDAMVV
PGSGLVKKQAEEEGLDKILIEAGFDWREPGCSMCLAMNPDKLKPQERCASTSNRNFEGRQ
GNGGRTHLMSPGMAAAAAVSGVISDVRKFPFLGDPSADPRLASNSKSRVFTTEELVSPGP
VISPPAPYLENLDAEIKGTADSAGLPKFNSLTGVAAPLDIQNIDTDMIIPKEFLKTIKRS
GLGFAAFAELRYENAEEVATIGEEVAKLRDDFILNKKGYESTKILIAGDNFGCGSSREHA
PWSINDMGIRCIISTSFADIFYNNCFNNGMLPVTLPRDQVEFLLEDAGTPGTEITVDLIN
QKVVCANGDEFSFEIDEFRKDCLVNGLDKIGLTLAKDEKISLFETSRSAQFPWLDGASFK
VPDVVPMYPDAGFWKREGVVA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttagtggatcgttaccgttctgcctgcttttagcgaataccgtggcctttgta
cccaatgctcggaatgcggcattccgcccggttccatcgagtctatttgcggctgggccc
cgaactctttacgacaaaatttgggatgatcatatggtcgacgacgatggtagctctttt
ctaatctacgtcgaccgccatttggtgcatgaagttacgtctccgcaggcttttgagggc
cttcgtttagcaaaacgtggagttcgtcgcccggactgcacgttggtcacagtcgaccac
aatgtccctacggccgatcgtaccggtctcattgacgttgctacttttattgaagagact
gcgagtcgtacgcaagttatgacgcttgaacagaatattaaggactttggtctcaaatat
ttctcctttgcggacgagcggcaaggaatagttcatattattggtcctgaacaaggattt
actttaccagggtgtgtgactgtttgcggagactcgcataccgcaactcacggcgcattc
ggtgctttagcgtttggaattggaaccagcgaagtagagcacgttctcgctactcagact
cttgcacagaccaagacgaaaaacatgcttatccgtgtcgacggagagcttggtgacggt
gtcacatccaaggacattattcttcatatcattggagttattggaactggcgggggtact
ggatacaccatagagtttggaggtacagctgttcagagttgctctatggaggcgcgtatg
tcgatttcaaacatggccattgaagctggagcgcgcgctggcatcattgctcccgacgat
acaacctacgaatatttaaagggacgcccgatgtgcccatctggcgaagaatgggagaag
gctgtcaaatattgggactcaatccggtctgacgaaggtgctgtctacgacaaaactatt
gttattgattcgaaagatatcgctcccaccgttacgtggggcaccagtccgcaggacgtt
gctcccattaccggaaatgttccgatgattcaggcggaaggacatgatgcttctcggcag
aatgctatcaagcgatccttgcaatacattgggcttgaagaaggtcagcctctcgagggt
gtcccgattgaaaaggtttttatcggttcttgtaccaatggtcgtattgaggatattcgt
aacgttgcagccattgccatgggacgcaaagttgccgaaggcgttgatgccatggtcgtt
ccaggatctggtttagtcaaaaagcaagcggaagaggaaggtcttgacaagattctcatc
gaagccggctttgactggcgtgaacctggatgcagtatgtgtttagccatgaacccagac
aaactcaaacctcaagagcgctgcgcttctacttccaatcgcaacttcgaaggccggcaa
ggaaatggcggaaggactcacttgatgtcgcctggaatggccgctgctgctgctgttagc
ggagttatttctgacgttcgaaaattcccgtttcttggcgatccgtcggccgaccctcgt
ttggcttccaactccaagagtcgcgtctttactaccgaagagcttgtatctcctggtcca
gttatttcgcccccggctccatacctcgagaatctagatgctgaaatcaaaggcacagcc
gatagtgctggccttcccaaatttaactcgctgacgggtgttgcggctcctctcgatatt
cagaacattgataccgatatgatcattcctaaggaatttctcaagactattaagcgttcc
ggtcttggatttgctgcttttgctgaacttcggtacgaaaatgctgaagaagttgccacg
attggagaagaagttgcaaaacttcgtgacgacttcattttgaacaagaagggatacgaa
agcacgaagattctcatagctggtgataactttggatgtggatcaagtcgagaacacgct
ccgtggtccatcaacgacatgggaattcgctgcattatcagcacttcttttgccgacatt
ttctataacaactgcttcaacaatggtatgcttccagtgacacttccacgtgatcaagtg
gagtttctgctcgaggatgctggtactccgggaacagagatcacggtcgatttgatcaac
caaaaggtcgtctgtgccaatggtgacgagttttcgtttgaaattgatgagtttcgaaag
gattgcttggtcaacggattggataagatcgggttgacgctcgccaaagatgagaaaatt
tccttgttcgagacgtctcgttctgctcagtttccgtggctcgatggtgcctcattcaag
gttcccgatgttgtccctatgtaccctgatgccggattctggaaacgggaaggtgtggtg
gcctag
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