Phaeodactylum tricornutum: PHATRDRAFT_27385
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Entry
PHATRDRAFT_27385 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
pti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_27385
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_27385
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_27385
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
PHATRDRAFT_27385
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PHATRDRAFT_27385
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PHATRDRAFT_27385
Prokaryotic type
Other AARSs
PHATRDRAFT_27385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
7201101
NCBI-ProteinID:
XP_002180248
JGI:
27385
UniProt:
B7FYY2
LinkDB
All DBs
Position
8:complement(492320..494492)
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AA seq
697 aa
AA seq
DB search
MSDRETSGTMDAEYSTVALKGRELEWAVNSPELLASHKAVNGSIIRTRFPPEPNGYLHIG
HAKSMNMNFRLAFDKLGVPEAHRRTIFRYDDTNPEAESAEYIDSLRRDVAWLGWTPERTT
YSSDNFQQLHDYAVVLIRKGLAYVCDMTKAEMEIQRELAMKRANARNTGKDPDVECPIPS
EDILPGRNRNTSVDRNLELFEKMKLGFFNEGSYTLRLKMDLESSNPNMYDLVAYRIKYTA
HPHAGSGWCIYPSYDWTHGTCDSLEHIDYSICTLEFETRREPYFWILWALDLYRPNVYEM
SRLNLQYTVLSKRRLIKLVEKGWVRGWDDPRMPTVSGLRRRGYTAHILNSFCSDVGASRA
SNVVEITKLQQTARVNLSDLSRRVMAALEPIEVVLTNFGTETAQDATLTFEVQNSPTDVS
LGFHTVTLTPTIYLDSADFRLEDSPQYYGLAPNKAVGLKYYGGNLVCEKVIQDKDGNVVQ
LEGRLDKSENREKPKTYLSWVPSDGIRCEVRVYNELFTVPEPSDLWEDEVNTESEIVHQQ
AIVDPSIRDVVCVHDIDKWKSNVSLQFERLGYFVVDYETTYNGATNEGHLIFNRTVTLKE
EVFKKKLTKEEEDKITARKAQTKNDLEAKGIRMQIDALNLFKEAEEYRGKYSKYDAGTGV
PTHEVDGTELTKSMMKKLAKEQVKHKKQQLAWNKNNK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagagaaacgagcggcacgatggatgcggagtactcgaccgtggcactgaaa
gggcgggagttggaatgggccgtcaactcgcccgaactcttggcttcccacaaggccgtg
aacggctccattattcgcactcgttttccgcccgagcctaacggctacctccatatcgga
cacgccaagtcgatgaacatgaactttcgtctcgcgttcgacaagcttggtgtcccggaa
gcacaccgtcgtacgatttttcgctacgacgataccaacccggaagccgaatccgccgag
tacattgacagtttgcgtcgagatgtggcttggctaggatggacaccggaacgaacgacg
tacagctcggacaactttcagcaactgcacgactacgccgttgttcttatccgaaaggga
ctcgcgtacgtgtgtgacatgaccaaggccgaaatggagatccaacgggaactcgctatg
aaacgagccaacgcccggaataccggcaaagaccccgacgtggaatgtcccattccaagt
gaagacattctacctggacgcaatcggaacacttctgtggatcgcaatttagaattgttt
gaaaaaatgaaactcggattcttcaatgaaggctcctacacactccggttgaaaatggat
ctcgaaagctccaatccgaacatgtacgatttagtcgcctaccggatcaagtacactgcg
cacccgcacgccggttctggttggtgcatttaccccagttacgattggacacacggcacc
tgcgacagtttggaacatattgattacagtatttgtacactcgagttcgagactcgccgt
gaaccatacttttggattctgtgggccctcgacctataccggccgaacgtgtacgaaatg
tcccgtttgaacttgcagtataccgttttgtcgaagcgtcgactcattaagctagtcgag
aagggctgggttcggggttgggacgacccccgaatgcctactgtatctggtctacgacgt
agaggctacacggcccatattctcaactccttttgctccgatgtgggcgcgtctcgagca
agtaacgtggtagaaattaccaaactgcaacaaacggctcgtgttaatctttctgactta
tcacgacgagtcatggcggcgttggagcccattgaagttgttttgacgaatttcggtaca
gaaacggcccaggatgcaaccctgacgttcgaagtgcaaaacagtccaaccgatgtgagc
ctcggatttcacacggttacattgacgcctacaatatacctggattcggcagatttccga
ttggaagattcaccgcagtattacgggctcgcgccgaacaaagccgttggtctcaagtat
tacggaggcaatcttgtttgcgaaaaagtcattcaagacaaagacggaaacgttgtccaa
ttggaaggccgtctcgacaaatcagaaaatcgggagaaacccaagacatacttgtcttgg
gtcccatcggacggcatacgctgcgaagtccgtgtctacaacgaactctttaccgtcccg
gaaccttcggatttgtgggaagatgaagtcaatacggaatcggaaattgtccatcaacaa
gcaattgtcgatccttccattcgcgacgttgtgtgcgtccacgacattgacaagtggaag
tcgaatgtttcgttgcagttcgaacgcctcggctactttgtcgttgactacgaaactacc
tacaatggcgccaccaacgagggccatttgatattcaaccgcaccgtcactcttaaggag
gaagtcttcaagaaaaagcttaccaaagaggaagaagacaagatcacagcgcgcaaggct
cagaccaagaacgatctggaagccaagggtatacgtatgcaaattgatgcgttgaatttg
tttaaggaggccgaggagtaccgaggcaagtacagtaagtacgatgcgggaaccggtgta
ccgacgcacgaggttgacggcacggaattgaccaagtccatgatgaagaaactggccaag
gagcaggtcaagcataaaaagcagcaactagcgtggaacaagaataacaaatag
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