Phaeodactylum tricornutum: PHATRDRAFT_30334
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Entry
PHATRDRAFT_30334 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_30334
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pti01009
]
PHATRDRAFT_30334
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_30334
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_30334
Protein phosphatases and associated proteins [BR:
pti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
PHATRDRAFT_30334
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
PHATRDRAFT_30334
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
PHATRDRAFT_30334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
PDS5
Cnd1
Adaptin_N
Mus7
ZIP4_domain
Cobl
DUF6059
Motif
Other DBs
NCBI-GeneID:
7195792
NCBI-ProteinID:
XP_002184078
JGI:
30334
UniProt:
B7GAI2
LinkDB
All DBs
Position
22:189069..191513
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AA seq
645 aa
AA seq
DB search
MPIPMDVDPVDDDPRPSSSPLSSPLLLRTVVPITREEEARQAIELLRGNDMAERVAAAHR
LDAVAAILGEERTRNELLPFLSDAVDDEDEVLLAMAQALGRMIDLVGGPTHAESLFLPLE
LLLSVEETTVRQAAAESTLFIASQLSESDYQSCYAKMIARLATQEWFTARISAVGLLSQA
YTSLRVEQQKEHLEFYANLAKDDTPMVRRVAAQYLGQMVQNVVRATGRSSLSETGSVVTT
LLPIFEEFSSNEQPDSVRLQTTENCVAFGQVLSEVDGDLNESEQGLLKKVLPLILATIDD
RSWRVRWTTAAKFSEVISAYGRLPDVMDSLVQGYEKLLQDPEAEVRTAATFNLAHVAKGD
AQVLVPPQHPERLVKRVTSLTEDESEHVRAALAMVATELAPILGREGTITFLVPPVLLLL
RDAASEVRLNLISSLSALNEVIGVDLLSQSLLPAILDLAQDGKWRIRMAIIQLIPLLAKQ
LGQEFVSEKLASLCVEWLGDDIATIRQAAASNIKDLTALFGTTWATEFLLPSIVDIRENE
SYLRRLTALQACSMMATEMDSDSARIEILPLILEMATDLVPNIRFNVAKELQSMAHACGI
SAYESQVLPVLNMLLEDEDRDVRFYAEKAATALDETFAAMDALIK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcccattccgatggatgtggaccccgtcgacgatgaccctcgtccctcttcatctcct
ttgtcgtcccctcttctgttgcggacagtggttcctatcacccgggaagaagaggctcga
caagcgattgaactactgcgaggaaacgacatggccgaacgggtggcggcagcgcaccgc
ttggatgccgttgcagctattttaggcgaggagcgcacacgaaacgaattgttaccgttt
ctgagtgatgctgtggatgatgaagatgaagtgctgttagcaatggcacaagcactgggt
cgcatgatagatcttgttggcgggccaacgcacgccgaaagcttgtttctacctctggaa
ctccttctgagcgtcgaagaaacgacggtgcgccaggccgccgccgaaagtacactcttt
attgcgtcgcaactttccgagtccgactaccaatcctgttacgcaaaaatgatcgcacgt
ttggctacgcaagaatggttcaccgcccgtatttctgccgtgggcctcttgtcacaggcc
tacaccagtctgcgtgtcgaacaacagaaagaacatttggaattttatgcgaatctcgca
aaggacgatactcccatggtccgtcgagtagcggcacaatacttgggacaaatggtacaa
aatgtggtccgagctacaggaaggagctctttgtcggagaccggaagtgtcgtaacaact
ctcttgcccatatttgaagagttctcttcgaacgaacagcccgattccgttcgactgcaa
accaccgagaactgtgtggcgttcggacaggtactgagtgaggtggacggtgatttaaac
gaatccgagcaaggattactgaaaaaagtattgcctttgatacttgcaacgattgacgat
cggtcctggcgagtccgatggacgacggctgccaaattctcagaagtaatttccgcctat
ggtcgactccccgatgtcatggattccctggtacaaggctatgaaaagctcttgcaagat
ccagaggctgaagtgcgaacagctgctactttcaacttagctcacgtcgcaaagggcgat
gctcaagtcctcgttccgcctcaacacccagagcgcctggtaaagcgagtaacaagtcta
acggaagacgaaagcgaacatgtccgcgcagcgcttgccatggtggcgactgagctagct
ccgattttgggtcgcgaaggtaccattacatttcttgttccccctgttctcttattgctt
cgtgacgcagcttcggaggttcgattgaatcttatttcctcgctgtcagctttaaatgaa
gtgatcggtgtcgatctactatcgcagtcactactaccagccattctcgatttagcccaa
gatggcaagtggagaatccgtatggcaattatccaacttatacctctgctcgccaagcag
ctaggacaagaatttgtgagcgagaagcttgcttctctctgcgttgaatggctcggtgat
gatattgcaactattcggcaagcggcagctagcaatatcaaggacttgactgccttgttt
ggcacaacttgggcaactgagtttcttcttccatcgatcgtggacattcgagaaaacgaa
tcttaccttagacgattaacggcgcttcaggcatgttcgatgatggcaaccgaaatggat
tctgattcggcacggatagaaatattgcctctcattcttgagatggcaacagaccttgta
ccaaacatcagatttaatgtggcaaaggaactgcaatccatggctcacgcgtgtggcatc
tcggcttacgaatcacaggttttgcctgtattgaatatgctgctcgaagatgaagatagg
gatgttcgattttatgccgaaaaggctgccactgctttggatgagacatttgccgctatg
gatgcattaatcaaatag
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