Phaeodactylum tricornutum: PHATRDRAFT_42015
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Entry
PHATRDRAFT_42015 CDS
T01075
Symbol
SCS-alpha
Name
(RefSeq) ligase succinate-coa ligase
KO
K01899
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00020
Citrate cycle (TCA cycle)
pti00640
Propanoate metabolism
pti01100
Metabolic pathways
pti01110
Biosynthesis of secondary metabolites
pti01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PHATRDRAFT_42015 (SCS-alpha)
00640 Propanoate metabolism
PHATRDRAFT_42015 (SCS-alpha)
Enzymes [BR:
pti01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
PHATRDRAFT_42015 (SCS-alpha)
6.2.1.5 succinate---CoA ligase (ADP-forming)
PHATRDRAFT_42015 (SCS-alpha)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-GeneID:
7201458
NCBI-ProteinID:
XP_002180696
JGI:
42015
UniProt:
B7G0K7
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Position
9:complement(717119..718204)
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AA seq
309 aa
AA seq
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MSSTAKVWVDKNSRVICQGFTGKQGTFHSTQAIDYGTNMVGGVTPKKGGQEHLGLPVFNT
VQEAVDGVQPDASVIYVPPPYAAQAILDAIEAEIGLVVCITEGIPQQDMARVKHALRLQD
RTRLIGPNCPGIIKPGECKIGIMPGYIHRPGKIGVVSRSGTLTYEAVWQTTVTGLGQSTC
VGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGF
IAGLTAPPGRRMGHAGAIIAGGKGGAEEKFQALESAGVHVSRSPARLGATMLEAMGLEAP
ETPLEPQSA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaccgccaaagtgtgggtggataagaacagtcgcgtgatctgtcaagggttc
accggaaaacagggaaccttccattcgacgcaagccattgattacggcaccaatatggtt
ggtggagtcacgccgaaaaaaggcgggcaggagcatctcggtctaccggtatttaacacg
gtccaagaagccgtcgacggggtacaaccggacgcctcggttatttacgtgccgcccccc
tacgcggcccaagccattctggacgcgatcgaggccgaaatcggactcgtcgtctgcatc
acggagggaattcctcagcaagacatggcgcgcgtcaaacacgccttgcggctacaagac
aggacacgcttaattggacccaattgtcccgggattattaaacccggtgaatgcaagatt
ggtatcatgccagggtacattcaccggcctgggaaaatcggtgtagtgtcgcggtcggga
acactaacgtacgaagcagtttggcaaactacggtaacgggactgggccagtcgacatgt
gtcggtattggcggggaccctttcaatggaaccaactttattgattgcttggaacgtttc
accaatgatcccgagacggaaggtatcatcatgatcggagaaattggtggatcggccgaa
gaagaagccgccgaatggctcaaggaatacggcgaccccaacaaacctgtggttggcttt
attgctggactcacagctcctccgggacgtcgtatgggacatgctggtgccattattgct
ggaggaaagggcggtgcggaagaaaagttccaggccctggagtctgctggagttcacgtg
tcgcgctctccagctcgtctcggagccaccatgctcgaagccatgggactggaagcgccg
gaaactccgcttgagccgcaaagtgcttga
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