KEGG   Phaeodactylum tricornutum: PHATR_46740
Entry
PHATR_46740       CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHATR_46740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pti03021]
    PHATR_46740
Transcription machinery [BR:pti03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     PHATR_46740
SSDB
Motif
Pfam: HMG_box CBFD_NFYB_HMF Histone HMG_box_2 CENP-T_C
Other DBs
NCBI-GeneID: 7204516
NCBI-ProteinID: XP_002185865
JGI: 46740
UniProt: B5Y3M8
LinkDB
Position
11:complement(336403..337689)
AA seq 338 aa
MATVRSSNPSGMEETTVHPTALGTTDAAASTDDPSESSLPVDKGSTVRDVGDNAREDEPE
AALHAETTEPAATAATDPDGAIRTVATLCRDDDQESHSTDATNCTTVLPQKPVKRARTAY
FIFADDHRARVQKEHPGEGVATQAKALGHLWANLPADAKLVYQNQAAQERERVAQQLQAW
KDAGGLATATTNTGLGANSSLLESSSPANNNADSLVFPVARVRKICKLDTDVKGLSKEAL
LLVTKAAELFTSQLGTETTRVAQIQNRRTLLPDDVAQVCAARARFDFLQPDIQDLTRQQQ
TQARVHQQEKAAAAGEVATGRANGKNITDYFAAVPQPE
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcaaccgttaggtcgtcgaacccgagcggcatggaagaaaccaccgtccacccgacg
gctttggggacaaccgatgccgccgcatccacggacgacccgtccgagtcgtctctgccc
gtcgacaagggaagtactgtacgggatgtcggcgacaacgcacgagaagatgaaccggag
gcagctttgcatgcggagacgacggaaccagccgctaccgccgccacggatccggacggt
gccatccgcacagtcgccacgctgtgtcgggacgacgaccaagagtcacactctacggat
gccaccaactgtaccacggtccttccacaaaaaccagttaaacgagcccgcacggcgtat
ttcattttcgccgacgaccatcgagcacgagtccagaaagaacatccgggcgaaggcgtg
gcgacacaggccaaagcactcggtcacctttgggcgaacttaccggccgacgccaagttg
gtgtatcagaaccaagccgcacaggagcgagagcgtgtcgcccagcaactccaagcctgg
aaagacgccggaggtttggcgaccgcaacgaccaacactggcttgggtgccaactcgtcg
ttgttggagtcgtcgtcccctgcgaataacaatgccgattccctcgtgtttcccgtggcc
cgcgtacgcaaaatatgcaaactcgatacggacgtcaagggactttcgaaagaagccttg
ttgctcgtcaccaaggccgccgaactcttcacgtcgcagctcgggacggaaaccacccgc
gtcgcgcagatacagaatcgtcgcacactcttaccggacgacgtggcgcaggtatgtgcc
gcccgcgcccgctttgactttttgcaaccggacattcaggatttgacccgccagcaacaa
acgcaagcgcgggtgcatcagcaagaaaaggcggcggccgccggggaagtggcgaccggc
cgcgccaacgggaaaaacatcacggactactttgcggcggtcccgcaaccggagtag

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