Paramecium tetraurelia: GSPATT00004789001
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Entry
GSPATT00004789001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSPATT00004789001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00004789001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GSPATT00004789001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
AAA_27
THP2
MCCD1
DUF1827
Motif
Other DBs
NCBI-GeneID:
5011599
NCBI-ProteinID:
XP_001425815
Genoscope:
GSPATT00004789001
UniProt:
A0BIQ0
LinkDB
All DBs
Position
undetermined
AA seq
1108 aa
AA seq
DB search
MKQTTLQRFLTSSQKKNDTSSLNVNKTSNSNTVFEEKKVDIQYIKPSTSITKEEVQAIKD
KLLEKAQERPQQFSRLKRNNVVESDEEQEKKNEFLDEFKIEKFSFVCSQEKNKERKSLAV
FVKQDIPKNNIKSQQKQKKSEYDKSGKMKKQSVKLEEEEPDDFQENKQGNLDFKLPTDKI
NVHEEFDDVTPQWATIGSSRDKSGKLHGTSDADPTTLFIPQNEFNKLTKCMQQFWKYKSE
NFDKIIFFKLGKFYELFYEDAYIGNKYLDLNWMGRKMHTGFPEKAVHKYKALLLEYGYKV
VIVDQTETPEQMNQRVAQNKKAGVGNTDKIVQRSVSEILTKGTYLYEEGESQMNLDEKVL
LVIRKKILSNTIEEYGMAILERQTNTISLAFIENRDKNYESLKTLLLHMRPVETVIDSNN
LPSFDPITKMISGSVIKSVISHITASKDNWDEKKALFRLEQYYQNGLPAAIKFYKNNQVV
LQALNGLFTYLNQILILDRVLGCAQFKLYDEEFSLQQCMILDSQAIYHLEILQTTNQVDK
KDFSLFGVLNKTVTPGGHRLLRRWVCAPLYQIDQIRERQTMVCDISNFRKERDLFRQSIK
QFPDFERRCSRIYEYSIKTESKAVFYENLSEQRLKEFKNLTKSLRLAQQEIALFGQYKIN
FRSERLRNMMTYEADGGLLPNVKEQLDEFEQYIIWEKEKDKEVPKPVTGVLESYDQSVAE
VELVEQKLDSYLQQIKRKLFKNNSNIQYAHAKFRYEIEIPDELVQKSKPEDFEFTSSRQG
YKRYLTQEIKDLVTELEQAEETKKQQLTAFGNFIFKHFHSNQHVWDSLIKILNELDALCS
LSVYGDTSEGKMTVPKFTTDKIKLVIKEGKHPCLTNINFVSNSIDMGEKLTKFQLLTGPN
MGGKSTTLRMVCILAVLAQIGCSVPCEEMELSPIDRIFTRIGAKDYLMEGKSTFYVELEE
TLIPLKYGTKNSLFITDELGRGTSTYDGVAIASAVMHYLIKTIQCRVLFATHFRILIEEA
KLISEVTNVHMACYISNGKVIFLYRLKEGACEASFGINVAKVVGIEDSIIMKAEEMANFF
ENKVQKNTEQTLQKFNQIINEYGIIQGY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaaactactcttcaaagattcttaacttcttcttagaaaaagaatgatacaagc
agcttaaatgttaataagacctcaaattctaatactgtattcgaagaaaaaaaggtagac
atctaatacattaagccttcaacttcaatcacaaaagaagaagtttaggctattaaagat
aaattacttgaaaaagcacaagaaaggccataataattcagtaggttgaaaaggaataat
gtagtagaaagtgatgaagaataagaaaaaaaaaatgaatttttagatgagttcaaaatt
gaaaaattttcttttgtatgctcttaagaaaagaataaagagaggaaatctttagccgtg
tttgttaaataagacattccaaaaaataatattaaatcctagtagaagtaaaaaaagtca
gaatatgataaatcaggcaaaatgaaaaaataatctgtaaaattagaagaagaggaacct
gatgatttttaagaaaataagcaaggaaacctagatttcaagcttccaacagataaaatt
aatgtgcatgaagaatttgatgatgtgacccctcaatgggcaactattggttcatcaaga
gataaaagtggtaaattacacgggacttcagatgcagatccaactaccctctttattcct
taaaatgaattcaataaattaaccaaatgtatgcaataattttggaagtataagagtgag
aacttcgataagatcatattttttaaattaggaaaattttatgaattattttatgaagat
gcttacattggaaataagtatttagatttaaattggatgggacgaaagatgcatacagga
ttcccagaaaaagctgtccacaaatataaggctctgttattggagtatggatacaaggtt
gtaatagtagattaaacagaaactccagaatagatgaatcaaagagtggcttaaaataag
aaagctggagtggggaatactgataaaatagttcaaagatcagtaagtgagatcttgaca
aaaggaacatatttgtatgaggagggagaatcataaatgaatctagatgaaaaggtttta
ctagtgataagaaagaaaatcttatcaaacacaatagaggaatatggaatggctattttg
gaaagataaacaaatacaatatcacttgcatttattgaaaatcgagataaaaactatgaa
tctcttaagacattattattgcatatgaggccagtggaaacagttattgattctaataat
ctaccttcatttgatccaataactaaaatgatatcgggatctgttatcaaaagtgttatt
tcccatataacagcctcaaaagataattgggatgaaaagaaggctctatttagattagaa
taatattattaaaatggacttcctgcagcgattaagttttataaaaataactaagttgtt
ctttaggctttgaatggattgtttacttacttgaattagatcttaattttagatcgagtc
ttgggatgtgcctaattcaaattatatgatgaagaattttcacttcaacaatgtatgatt
ctagatagttaagcaatttatcatttagagattctgcaaactactaattaagtagataaa
aaagatttctctttgtttggtgtcttaaacaaaactgttactcctggtggacatcgatta
ctgagaaggtgggtttgtgcacccctttattaaattgatcaaattagagagagataaacc
atggtttgcgatataagcaactttagaaaagaaagagatctatttagatagagtattaag
taatttccagattttgaaagaagatgcagtagaatatacgaatattcaattaaaactgaa
agtaaagcagtattctatgaaaacctttctgaacaacgactaaaagaatttaagaatctt
actaaaagtttgagattggcataacaagaaatagcattatttggtcaatataaaataaat
ttcagaagtgagagattaagaaatatgatgacttatgaagcagatggaggcttactacca
aatgttaaagagtaattagatgaattcgaataatatattatatgggaaaaggaaaaagat
aaagaagttcctaaaccagttacaggagtcttagagagctatgattaatcagttgctgag
gttgagttagtagaataaaagcttgatagttatctctaacaaataaaaagaaaactgttt
aagaataatagtaacatctaatatgcacacgccaagttcagatatgaaattgaaattcca
gatgagttagtttaaaagtcaaaacctgaagattttgaattcacttcttcaagataggga
tataagagatatttaacttaagaaattaaggatttagttaccgaattagaacaagctgaa
gaaactaaaaagtaatagctcactgcatttggtaatttcatattcaagcattttcattct
aattagcatgtttgggattctcttataaagatattaaacgaattggatgctttatgttcc
ttaagtgtatatggagatacatcagaaggaaaaatgacagtgccaaaatttactactgat
aaaattaaattagttatcaaagaaggaaaacatccttgtttgaccaacatcaattttgtt
tcaaattcaattgatatgggggaaaagcttactaaattttaattattgaccggtcccaat
atgggaggcaaaagcactactttgagaatggtttgcatactcgcagttttagcataaatt
ggatgttcagttccatgcgaagaaatggaactctctcctatcgatagaatatttacaagg
ataggagctaaagattatttaatggaaggaaaatcaactttttatgttgagttagaagaa
acattaataccattaaaatatggaaccaaaaattctttatttatcactgatgaattagga
agaggcacttctacatatgatggagttgctattgcctctgctgttatgcattatcttatt
aagactatttaatgtagagtgctatttgcaactcattttaggattttaatcgaggaagcc
aaactaattagcgaagtgactaatgttcatatggcttgttatatttcaaatggaaaagtc
atttttctttatagattaaaggaaggagcatgtgaagcttcttttggaataaatgttgcg
aaagttgtgggaattgaagattcaataataatgaaggctgaagaaatggcgaattttttt
gaaaataaagtgcaaaagaacacagaacaaactctacaaaaatttaattaaattataaat
gaatatgggattatttaaggatattga
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integrated database retrieval system
