Paramecium tetraurelia: GSPATT00010750001 Help Entry GSPATT00010750001 CDS       T01055                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism ptm  Paramecium tetraurelia Pathway ptm03020   RNA polymerase ptm03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ptm00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     GSPATT00010750001   09124 Replication and repair    03420 Nucleotide excision repair     GSPATT00010750001  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ptm03021]     GSPATT00010750001    03400 DNA repair and recombination proteins [BR:ptm03400]     GSPATT00010750001 Enzymes [BR:ptm01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      GSPATT00010750001 Transcription machinery [BR:ptm03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      GSPATT00010750001 DNA repair and recombination proteins [BR:ptm03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       GSPATT00010750001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP DUF5634 FYVE_2 Motif Other DBs NCBI-GeneID:  5027731 NCBI-ProteinID:  XP_001441946 Genoscope:  GSPATT00010750001 UniProt:  A0CUT2 LinkDB All DBs Position undetermined AA seq 1214 aa AA seqDB search MSDIDEESSKLFSQDSMQQDDDDEHQRLDNDDIWKVLQMFFQTHGLVSQQIGSYESFVEN VIKFVRGHEGTFVVRVKPQYKEEERQEAYLEYLYQFQITRCFMGKKNIHVDKFEEEIFPM IARLRDLTYSRQLKIDLEVTMQQRNKRDGTIEEKSKQQFKGLPFFKLPIMVRSRFCSLQK DPKDAELIQLRIQNGECGFDQGGYFILRGSEKVIVAQERIANNVVLVFKSKIVNKPWVAE IRSQPDLFSNPNVFKVELRYIQNTPVIRCSVKQFNSTQGIPLFTLFRALGISSDQEILER IVYNLEDEFMGPMLEMLYGSLQEGGEYEDEELCLRWIGNKIKKAENQDPETLIQEAKKLI NKNILPHIGVSTESRDRKAYFLGYIVHRLLNASLGKTDQDDRDHYGKKRLDMAGAMMMGV FKTSFEQFKQNSKKALEKYINGGRRGRGQQTKIENMRQPDDIKSFFDGEQISKDIDNALA TGNWGRSKEGQVVKTGVAQTLKRETSLFATLSHLRRMNAPINPQMKLSKPRQLHNTHFGF ICPAETPEGQKIGIVKNLSLMTTVSNDLQSKDKETLLKLIMVSQQNDFDFILLQGDFQAQ DIPRMTKVLVDGNWIGFTRNPEQFIHEFKNLRSAEESYIPIEVSINFDYVNKEIRIYTDA GRCMRPLFIVQNNKLKLMKGVLNQINDWEELLKNKCVELLDVEEEEGSLIAMDIDIMMRG TQNFKRYTHCEIHPCMMFGVCASVIPFANHNQGPRNTLQSAMGKQAMGLNSTNFNIRFDT LVHILHYPQKPLASSRAVDFITVNEVPIGINCVTSIACFTGYNQEDSIIINQYAIDRGFF RSVFYRTYKESEDKDPDNFTETKITKPIGDNFAGKLFIKLDSDGIVPPGTKVDEEEPIIG KELIIDNIMLNTANGQKNTKECSLLTRRAERGVVDSVLISENQKGYKLVKVKVRSLRIPQ IGDKFCSRHGQKGTCGMTYRQEDLPYTLVGISPDLTINPHCIPSRMTIGHLIECLSSKLA SIKGQFNDATPFAQILVNDIANELHKVGWQKWGNEVMTNPYTGNMFSIPIFVGPTYYQRL RHLVDDKMYARSRGPVTGITRQPTHGRSRKGGLRFGEMERDCIISHGTAKFLKERTYDVS DAFRVHVCSKCGMFAVANLENQEFYCNLCKNQNNQNKIYQVQMPYAAKTLIQELISMNIA PRLKFDQSKMKHEI NT seq 3645 nt NT seq  +upstreamnt  +downstreamnt atgtccgacattgatgaagagtcttcgaaattattctcgtaagattctatgcagcaggac gatgacgacgaacattagagattagacaacgatgacatttggaaggtccttcaaatgttt ttttaaactcatggattggtctcatagtaaataggctcgtatgaaagcttcgttgaaaat gtgatcaaatttgtaagaggacatgaaggtacttttgttgtcagagtcaaacctcaatac aaagaagaagagcggcaagaagcttatcttgaatacctatatcaattctaaataacaaga tgtttcatgggaaaaaagaatattcacgtggataaatttgaggaagaaatctttcctatg atcgctcgattaagagatcttacctactcaagataactaaaaatagacttagaagtcacg atgtaataaagaaataaaagggatggcacaatagaagagaaaagtaaacaataatttaaa ggactaccttttttcaaattgcccataatggtaagaagtaggttttgttcattgcaaaaa gatccgaaggatgctgaactaatatagctgagaatataaaatggggagtgtggattcgat caaggaggatattttatattaagaggatctgaaaaagttattgttgcttaggaaagaatt gcaaacaatgtggtgttagttttcaaaagcaaaatagtcaataaaccatgggtggctgaa attagatcataaccagacttattttccaatccaaatgtctttaaagttgaacttcgatat atttaaaacactcctgttatcagatgcagtgttaaacaattcaattcaactcaaggaata ccactttttactttattcagagccttgggcatcagtagtgattaagagattttagaaagg atcgtttacaatttagaagatgaatttatgggtcccatgttagaaatgttgtatgggtct ttgcaggaaggaggtgaatatgaagatgaagaattatgtttgagatggataggaaataaa ataaagaaggctgaaaattaagatcctgaaactttgatttaggaggctaaaaaattgatt aataaaaatatcttaccacatattggagtctcaactgaaagtagagacagaaaagcttat tttttgggatatatagttcatagactattgaatgcatcattgggaaaaacagattaggat gacagagatcattatggcaaaaaaagattggacatggccggagctatgatgatgggagtg ttcaagacatcattcgaataatttaaatagaattctaaaaaggccttagagaaatacatc aatgggggaagaagaggaagaggataacaaacaaaaatagagaatatgagacagcccgat gatattaaatccttttttgatggagaataaatatccaaagacatcgacaatgcattagcc actggaaattggggaagaagtaaggaaggttaagttgttaagacaggagtggcttaaact ttaaagagagagacatcattatttgcaactcttagtcatttgagaaggatgaacgcacca attaatccataaatgaaattgagtaaacctagacaattacataacactcattttggattc atctgtccagctgaaacacctgaaggataaaaaattggtatcgtcaagaacttatcttta atgactactgtttcaaatgatttataatcaaaagacaaagaaacattgttaaaattgatt atggtttcttaataaaatgactttgactttatcttgcttcaaggagatttctaagcctaa gacatacccagaatgacgaaagtattagtcgatggtaattggataggatttactagaaac cctgaataattcattcatgaattcaaaaaccttagatccgctgaagaatcttacattcct attgaagtatccatcaacttcgattacgtgaataaagaaattagaatctacactgatgct ggaagatgcatgagacctttatttattgtccagaataataaattaaagttgatgaagggt gttctaaatcaaataaatgattgggaagaattattgaaaaataaatgtgtagaattattg gatgtcgaagaagaggaaggttctttaatagccatggacatagatattatgatgagaggt acacagaactttaagagatacactcattgcgaaatacacccatgtatgatgtttggtgtt tgtgcatcagttattccatttgctaatcacaactaagggccaaggaatactttataaagc gctatgggtaaataggctatgggattgaattcaacaaatttcaatatcagatttgacaca ttggttcatatcttacattatcctcaaaaacccttagcatcatcaagagcagtagatttt atcacagttaatgaagttcccataggcataaattgcgttacatcaattgcatgttttaca gggtataaccaagaagattcaattattatcaattagtatgcaatagacagaggattcttc cgatctgtcttctatagaacatataaagaatcagaggataaggatcctgataatttcact gaaactaaaataacaaaacctattggtgacaattttgcaggcaaattatttatcaaatta gatagtgatggaattgtaccaccaggaactaaagtagatgaagaggagcctattatagga aaagaattaattatagataatataatgttgaacacagcaaacggttaaaaaaatacaaag gaatgttcattattaacaaggagagcagaaagaggagttgttgattctgttttgattagc gaaaatcagaaaggatataaattagtaaaagtaaaggtgaggtcattaagaatcccacaa atcggagacaagttttgcagcagacatggacaaaagggaacttgtggaatgacttatcga caagaagatttaccttacactcttgtaggcatttctccagatttaactatcaatccacat tgtattccatcaagaatgaccataggacatttaattgaatgtttgtcatcaaaattagct tccatcaaggggtagttcaatgatgctacaccatttgcatagatattagtaaatgatatt gctaatgaattgcataaagttggatggcaaaaatggggtaatgaggttatgacgaatccc tacacgggtaatatgttttcaattcctatttttgttggacctacttattattagagatta agacatttagtagatgataagatgtatgcaagatcgagaggacctgtaactggaatcacc agataacctactcatggtaggagtagaaagggaggattaagattcggtgaaatggaaaga gattgcattatttcacatggcactgctaaatttttaaaggaaaggacatatgatgtatca gatgcattcagagttcacgtttgttctaaatgtggaatgtttgctgttgctaatttggaa aatcaagaattctactgcaatttatgcaaaaatcaaaataatcaaaataaaatttattaa gttcaaatgccatatgcagcaaagaccctaatttaagagctgatttcaatgaatattgct ccgagattgaaatttgattaatcgaaaatgaaacatgaaatttga

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