Paramecium tetraurelia: GSPATT00017176001
Help
Entry
GSPATT00017176001 CDS
T01055
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ptm
Paramecium tetraurelia
Pathway
ptm03020
RNA polymerase
ptm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GSPATT00017176001
09124 Replication and repair
03420 Nucleotide excision repair
GSPATT00017176001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptm03021
]
GSPATT00017176001
03400 DNA repair and recombination proteins [BR:
ptm03400
]
GSPATT00017176001
Transcription machinery [BR:
ptm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GSPATT00017176001
DNA repair and recombination proteins [BR:
ptm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GSPATT00017176001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_9
Motif
Other DBs
NCBI-GeneID:
5035986
NCBI-ProteinID:
XP_001450201
Genoscope:
GSPATT00017176001
UniProt:
A0DID7
LinkDB
All DBs
Position
undetermined
AA seq
308 aa
AA seq
DB search
MYKYNFEQNSQHRIEILELSDEKCKFSFEGDLSIANAIRRVMIAEVPVMAIHFVDIIENT
SPLSDEFLAQRLGLIPLVSYAADSKMYDWEADADSIDDQKTKVVFTLRQKNLNDAPLEIT
SQHLEPEFGQVGEMAIRPVRMFSPINGKEVGIPITRLGKNQSVHVRCHALKGFGKMHAKW
TPINIATFRHEAELNFDHSQTQSLSLFEKQSIRDSCPMNVFAMDANQDLIVNAIEKCVFC
EECIRCAESMKKPRLIKMQHKKNKYIFTVESAGQLKAADIVQKALIVLRKKVDEISQDLS
FAQQQQQI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagtacaacttcgaacaaaactctcaacatcgtatagaaatcttggagttgagt
gatgagaagtgcaaattcagctttgaaggcgatttgtccattgcaaatgccatccgaaga
gttatgattgcagaagtccctgtcatggcaattcattttgttgatattattgaaaacaca
agtcccctgtcagatgaattccttgcctaaagacttggtttgatacctctcgtttcatat
gctgctgacagcaaaatgtatgattgggaagctgatgcagattccatagatgatcaaaaa
acaaaagtggtctttaccttaagataaaaaaatctgaatgatgctcctttggaaatcact
agtcaacaccttgaacctgaatttggataagtgggtgaaatggcaattagacctgtcaga
atgttttcgccaatcaatggcaaggaagtgggcatccctattacaagactaggaaagaat
caatctgttcatgtacgctgtcatgcactcaaaggttttggcaaaatgcatgctaaatgg
actcccatcaacattgcaacattcagacatgaagcggaactcaattttgatcattcctaa
acacaatccttgtccttatttgaaaaacagtcaatcagagattcttgtcccatgaatgtc
tttgctatggatgctaattaagaccttattgtcaatgccattgaaaagtgtgtgttctgc
gaagaatgtatccgatgtgctgaatccatgaagaaacccagattgattaaaatgcaacat
aaaaaaaataaatacattttcactgttgagagtgctggctaattaaaagctgctgatatc
gtttaaaaagcattgattgttttgaggaagaaagttgatgaaatatcttaagatctgagt
tttgcctaataataataacagatttga
DBGET
integrated database retrieval system