Planktomarina temperata: RCA23_c05190
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Entry
RCA23_c05190 CDS
T03229
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfB
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
ptp
Planktomarina temperata
Pathway
ptp00280
Valine, leucine and isoleucine degradation
ptp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RCA23_c05190 (lcfB)
Enzymes [BR:
ptp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
RCA23_c05190 (lcfB)
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AII86079
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Position
complement(556625..558142)
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AA seq
505 aa
AA seq
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MANPLYDALFGRHSGQATVFLQMQDGTALTHGQFLQQAAQYAHVLNSFGLHPGDRVAVQI
EKSPQSLAIYAACVQAGLIFLPLNTAYTASELSYFLEDSGARVVICDPKSQETLAPIAQA
TGAQLETMDAAGEGSFAQKAAAQPMEFATVPREAEDLAAFLYTSGTTGRSKGAMLTQNNL
LSNAEVLTRHWAFSATDALLHALPIFHTHGLFVATNIALLSGCKILFVPKFDLEAILALM
PQATCMMGVPTFYTRLLDDPRFDRALSQHMRLFISGSAPLLAETHKLFEERSGHRILERY
GMTETNMSTSNPYEGERRAGTVGFPLPGIELKITDSTTGETVAQGDIGEIEVRGPNVFKG
YWNMPEKTAEELRKDGFFITGDLGMIDADGYVQIVGRNKDLIISGGFNIYPKEIETVLDA
QEGVLESAVIGVPHPDFGETVLALLVPAKGVTPDLDAIQSHISEKLARFKLPKKLILLPQ
LPRNTMGKVQKNALRDQFRDLFTKS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccactttatgacgccttattcggtcgacattcgggacaggcgactgtcttt
ttgcagatgcaagatggcacggcgctcacccatggccaatttttgcagcaagcggcgcaa
tatgcccatgttttaaacagttttggcctgcaccctggtgaccgggtggccgtacagatt
gaaaaatctcctcaatccctggccatctatgccgcctgcgtacaagccggcctgatattt
ttgccgctgaacacagcctataccgccagtgagctgtcctatttcctggaggacagcggc
gcgcgggtggtcatttgtgatcccaaatctcaagaaaccctagccccgattgcccaggcc
actggggcgcagctggaaactatggatgccgcgggagaaggcagttttgcgcaaaaggcg
gcggcgcagcctatggagtttgcaaccgttccgcgtgaggcagaggatttggccgccttc
ctctacacgtccggcacgacaggtcgatcaaaaggcgcaatgctgacgcagaacaacctt
ctgtccaatgccgaggtcctaacccgccattgggccttcagcgccacggatgcgctcttg
catgctctgccgatttttcacacccatgggctctttgtggcgaccaatattgccctattg
tctggctgcaaaatcctctttgttccaaaatttgacctcgaggcgatcctcgctttgatg
ccgcaagcaacctgcatgatgggcgtgccgaccttttacaccagattgcttgatgatccg
cgcttcgacagggcgctgtcccagcatatgcggcttttcatctctggcagcgcgccgctt
ctggcggagacccataagctgtttgaagagcgcagcggtcatcgcatccttgagcgatac
ggcatgacagaaaccaatatgagcacctcgaacccctatgagggcgagcgccgcgcgggc
acggtcggatttccgctcccaggaatagagctgaaaatcaccgacagcaccaccggcgag
acagtggcacagggcgacatcggcgagatcgaagtgcgcggcccgaatgtgttcaaaggc
tattggaatatgcctgaaaaaactgccgaagagctgcgcaaggatgggtttttcatcact
ggagatctgggcatgattgatgccgatggctacgtccagattgtcggacgcaataaggac
ctgattatttcgggcggatttaacatctaccccaaagaaattgagacggtgctggatgcg
caagagggcgtgctggaaagtgccgtgatcggtgttccccacccggattttggcgaaacc
gtgctggcgctcctcgtgcccgcaaaaggcgtcacgcccgatctggacgcgatacaaagc
catatctccgagaagctggctcgtttcaaacttcccaaaaaactaatcctcttgcctcag
ctgccgcgcaatacgatgggcaaggtgcaaaaaaatgccctgcgcgatcagttccgcgat
ttattcaccaaatcctaa
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