Planktomarina temperata: RCA23_c25030
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Entry
RCA23_c25030 CDS
T03229
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthase LysS
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCA23_c25030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ptp01007
]
RCA23_c25030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptp03016
]
RCA23_c25030 (lysS)
Enzymes [BR:
ptp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RCA23_c25030 (lysS)
Amino acid related enzymes [BR:
ptp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RCA23_c25030 (lysS)
Transfer RNA biogenesis [BR:
ptp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RCA23_c25030 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Anticodon_2
tRNA-synt_1c
tRNA-synt_1b
tRNA-synt_1e
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AII88022
LinkDB
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Position
complement(2648796..2650370)
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AA seq
524 aa
AA seq
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MSKMRDAATQSKAWPFEEARRILKRFEKKLPEKGYVLFETGYGPSGLPHIGTFGEVARTT
MIMRAFQELSDIPTRLVCFSDDLDGMRKVPGNVPNPERLTAHLQRPLTSVPDPFEDYESF
GHHNNAMLRRFLDTFGFEYDFISATEFYQSGQFDQILLRAVEKYDDIMKVMLASLREERQ
KTYSIFLPIHPETGRVLYVPMKSVDAKNGTITFDTEEGEEMTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKDHSTNTPIYDKICRILGQPAPEHFSYELFLDENGQKISKTSGNGVS
IDEWLTYASTESLSYFMYLKPKTAKRMHFDVIPKAVDEYHQQLRAYEGQDDKARLNNPVW
HIHGGDVPVSKMVVPFSMLLNLASVSGAEDKDQLWGFIKRYAPEASAETHADLDAAAGFA
VRYYNDFVKPAKVYRAPTDLEREALIALRDGLKAWDQGLDGDALQSLVFACGRERFDPMR
DWFKALYEVLLGASQGPRFGGFIALLGIEESIALIDKGLAGEFT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaatgcgtgacgctgctactcaatcgaaagcctggccctttgaagaggcgcgg
cggattttgaaacgctttgaaaagaagctgccggaaaaaggctatgtcttgtttgagacc
ggctatggtcccagcgggctgccgcatattggcacctttggcgaagtggcgcgcaccaca
atgatcatgcgcgcctttcaagaattgagcgacatcccaacccggcttgtttgtttttct
gatgatctcgacggcatgcgcaaagtgccgggcaatgtgccaaatccggagaggctgacc
gcgcatttgcagcggcccttgacctctgttccagatccgtttgaggactatgagagcttc
ggtcatcacaacaacgccatgttgcgccggtttttggacacatttggctttgaatatgac
ttcatcagcgccacagagttttatcaatctggtcaatttgatcagattttgctgcgcgct
gtggaaaaatatgatgacatcatgaaggtgatgctggcctcgcttcgtgaggagcggcag
aagacctactcgatcttcctgcccattcaccctgagaccggtcgggtgctttatgtgccg
atgaaatctgtggatgcgaaaaatggcaccatcacctttgacacagaagagggtgaagag
atgacccttccggtgaccggcggtaatgtgaagctgcagtggaaacccgattttggtgcc
cgctgggcggcccttggggtagattttgagatgtatggcaaggatcactccaccaatacc
ccgatttatgacaaaatttgccgtattctggggcaaccggcaccggaacatttcagctat
gaattgttcctcgacgagaatgggcaaaaaatttccaagacctccggcaatggcgtgtcg
attgatgagtggttgacctatgccagcacggaaagcctgtcttacttcatgtatctaaaa
cccaaaactgccaagcggatgcattttgatgtcatccccaaggcggtagatgagtatcac
cagcaattgcgcgcctatgaggggcaagacgacaaagcacgtctgaacaatccggtgtgg
catattcatggcggcgatgtaccggtcagcaaaatggtcgtgcctttctcaatgctgctc
aatctggcgtctgtgtctggggcggaggataaagatcaactttggggattcatcaaacgt
tatgcccccgaggcttccgccgaaacccatgcggacttagacgcggcggcggggtttgcg
gtccggtattacaatgattttgtcaaacctgccaaagtctaccgcgcgcccacggatctc
gaacgcgaggctttgattgcgctgcgcgacgggctgaaggcttgggatcaaggtttggat
ggggatgcgctgcaatctttggttttcgcctgtggccgcgagcggtttgacccgatgcgc
gattggttcaaagcactctatgaggtgcttttgggcgcatcacaggggccgcggtttggc
ggatttattgcgcttttgggcatcgaagagagcatagccctgatcgacaaaggccttgcc
ggcgagtttacctaa
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