Planktomarina temperata: RCA23_c25370
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Entry
RCA23_c25370 CDS
T03229
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase PcaB
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00362
Benzoate degradation
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
ptp01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RCA23_c25370 (pcaB)
Enzymes [BR:
ptp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
RCA23_c25370 (pcaB)
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Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
AII88055
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All DBs
Position
complement(2685534..2686538)
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AA seq
334 aa
AA seq
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MTTVFDHAWMTGLFGDKGVAEHLSAEVQLAHMLRIEAAHSRSLGNESAARAIEAARIGPE
DLTEGTATDGVPVPQLVRCLKAQISPELHGDIHRGLTSQDVMDTALVLSLKDILPIFRQG
LIALQADLAQLTQAHGGGALMGRTRMQAALPITVADRLVTWRMPLERHLARLDEVRARVL
CVQCGGPVGLGAGGAALAAQLGLAAPDKSWHAMRDGFAELANWLSLVSGSLGKMGKDISL
MTQQGVDEMRLRAGGSSSAMPHKQNPILAELLVTLARYNSVQLGGMHQALIHEQERSGAA
WALEWMILPAMLHSTARGLRAAQELLAQVETIGS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtatttgaccatgcctggatgacaggcctcttcggcgacaaaggcgttgcg
gagcacctgtctgctgaggtgcaattggcgcatatgctgcgcattgaagcggcgcacagc
cggtcattgggcaatgaatctgcggcccgcgcgattgaggcggcccggataggcccagaa
gatttgacagagggaacggccacggatggggtgcctgttcctcagttggtgcgctgtctc
aaggcgcagatctcgccagagttgcatggggatatccaccgagggctgaccagccaagac
gtgatggacacggccctggttttatctttgaaggacattttaccgatcttccggcaggga
ttgatcgcgttgcaggcggatttggcgcaattgacgcaagcacatggcggcggtgccttg
atggggcgcacgcgtatgcaggccgcgcttcccataacggttgcagatcgccttgtcact
tggcggatgcccttggagcgccatctcgcgcggctcgatgaggtgcgcgcgcgtgtgctc
tgcgtgcagtgtggcggcccggtgggccttggcgcgggcggggctgcgcttgcggcgcaa
ttgggattggccgcgccggataaaagctggcacgccatgcgcgatggatttgccgaattg
gccaattggctgtcgctggtgtctggcagcttaggcaaaatgggcaaggatatttcgctc
atgacccagcaaggcgtggatgagatgcgcttgcgcgcaggcggctcttcctcggccatg
ccccataaacaaaacccaattttggcggagctattggtcaccctggcgcgctataattct
gttcagcttggcgggatgcatcaggctttgatccacgagcaagaacgctctggggcggct
tgggcgctggaatggatgattttgcctgcgatgctacacagcaccgcaagagggctcagg
gcggcacaagagctgctggcccaagtggaaacaatcggaagctga
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