Planktomarina temperata: RCA23_c25490
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Entry
RCA23_c25490 CDS
T03229
Symbol
kdsD
Name
(GenBank) arabinose 5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00540
Lipopolysaccharide biosynthesis
ptp01100
Metabolic pathways
ptp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RCA23_c25490 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptp01005
]
RCA23_c25490 (kdsD)
Enzymes [BR:
ptp01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
RCA23_c25490 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
ptp01005
]
Lipid A
RCA23_c25490 (kdsD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AII88067
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All DBs
Position
2695480..2696481
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AA seq
333 aa
AA seq
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MKNPIDPAASALSAVACFSAGMSQLQQAVDSAQMRGVIAGAANLIFAMKGRLILSGVGKS
GHVARKLAATFASTGTPAYFVHAAEASHGDLGMIQNDDVVMLLSWSGETGELADIIAYAA
RFDVPIVAITGKAEGTLARRAQYPIVLPAAQEACPHNLAPTTSTLLQMAMGDALAITLLK
MRGFTEESFRNFHPGGKLGAVLQPVREFMHQGDELPLLDQSAPVFDVVAEISNKEFGIVG
LLDAAGHLSGVITDGDIRRYLEKNANGMMQDVMWSNQAQDIMSPAPVTLRPENLGARSLH
TLQTRKISAAFVLDDGCPIGLVTVLQLLQRGVA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacccgatcgatcccgccgcatccgccctctcggccgtggcttgtttttccgcc
ggcatgtcccaattgcagcaagccgtagactcagcgcagatgcgcggcgtgatcgccgga
gctgcgaatttgatctttgccatgaagggccggctcattctatcgggggttggaaaaagc
ggacatgtggcgcggaaactggccgcgactttcgcctccaccggcacgccggcctatttt
gtccatgcggccgaggccagccatggcgatctgggtatgatccaaaatgacgatgttgtg
atgcttctctcttggtcgggtgaaacgggtgaattggccgatattatcgcctatgccgcg
cgctttgacgtacccattgttgcgataaccggcaaagccgagggcacattggcccgccgc
gcgcaatatcccatcgttctgcctgcagcccaagaggcctgcccgcataatctggcgccc
accacctcgaccctgttgcaaatggcaatgggggatgcgctggccattaccttgctgaaa
atgcggggtttcactgaggaaagttttcgcaacttccatcccggtgggaagcttggcgct
gtcctgcagccggttcgtgaatttatgcaccagggtgatgagctgccacttctggatcaa
tctgcccctgtctttgatgtggtggccgaaatctcgaataaagaatttggcattgtcggc
ttgcttgatgcggccggccatctgagcggcgtgataacggacggtgacattcgcagatat
ttagaaaaaaacgccaatggcatgatgcaggatgtgatgtggtccaaccaggcccaagac
atcatgagtccggcccctgtcaccctgcggccggaaaatctaggggcacgatctttgcat
acgctgcaaacaaggaaaatctctgccgcctttgtcttagacgatggctgcccgattgga
ttggtcacagtgttacagctgttgcagcgcggtgttgcctaa
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