Pan troglodytes (chimpanzee): 461944
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Entry
461944 CDS
T01005
Symbol
PRDM9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr00310
Lysine degradation
ptr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
461944 (PRDM9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
461944 (PRDM9)
03036 Chromosome and associated proteins [BR:
ptr03036
]
461944 (PRDM9)
Enzymes [BR:
ptr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
461944 (PRDM9)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
461944 (PRDM9)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
461944 (PRDM9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
461944 (PRDM9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SSXRD
zf-C2H2_4
zf-C2H2_5
SET
KRAB
zf_PR_Knuckle
Phage_F
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
461944
NCBI-ProteinID:
XP_016808991
Ensembl:
ENSPTRG00000028674
VGNC:
108109
LinkDB
All DBs
Position
5:complement(69237399..69258079)
Genome browser
AA seq
703 aa
AA seq
DB search
MSPERSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNA
LITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPLMALRVEQRKHQKGMP
KASFSNESSLKELSRTANLLNASGSEQAQKPVSPPGEASTSGQHSRLKLELKKKETEGKM
YSLRERKGHAYKEVSEPQDDDYLYCEMCQNFFIDSCAAHGPPTFVKDSAVDKGHPNRSAL
SLPPGLRIGPSGIPQAGLGVWNEASDLPLGLHFGPYKGRITEDEEAANNGYSWLITKGRN
CYEYVDGKDKSWANWMRYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDE
YGQELGIKWGSKWKKELMAGRGCSGSSPQSCSGFQMRENGWQDEGGEHGEPKPEIHPCPS
CCLAFSSQKFLSQHVERNHSSQNFPGPSARKLLQPENPCPGDQNQEQQYPDPRSRNDKTK
GQEIKERSKLLNKRTWQREISRAFSSPPKGQMGSCRVGKRIMEEESRTGQKVNPGNTAKL
FVGVGISRIAKVKYGECGQGFSVKSDVITHQRTHTGEKPYVCRECGRGFSWKSHLLSHQR
THTGEKPYVCRECGRGFSVKSSLLSHQRTHTGEKPYVCRECGRGFSQQSNLLSHQRTHTG
EKPYVCRECGRGFSVKSSLLSHQRTHTGEKPYRHARGSVGRGL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgaaaggtcccaagaggagagcccagaagaagacacagagagaacagagcgg
aagcccatggtcaaagatgccttcaaagacatttccatatacttcaccaaggaagaatgg
gcagagatgggagactgggagaaaactcgctataggaatgtgaaaaggaactataatgca
ctgattactataggtctcagagccactcgaccagctttcatgtgtcaccgaaggcaggcc
atcaaactccaggtggatgacacagaagattctgatgaagaatggacccctaggcagcaa
gtcaaacctcctttgatggccttaagagtggaacagcgtaaacaccagaagggaatgccc
aaggcatcattcagtaatgaatctagtttgaaagaattgtcaagaacagcaaatttactg
aatgcaagtggctcagagcaggctcagaaaccagtgtcccctcctggagaagcaagtacc
tctggacagcactcaagactaaaactggaactcaagaagaaggagactgaaggaaaaatg
tatagcctgagagaaagaaagggtcatgcatacaaagaggtcagcgagccgcaggatgat
gattacctctattgtgagatgtgtcagaacttcttcattgacagctgtgctgcccatggg
ccccctacatttgtaaaggacagtgcagtggacaaggggcaccccaaccgttcagccctc
agtctgcccccagggctgagaattgggccatcaggcatccctcaggctgggcttggagta
tggaatgaggcatctgatctgccgctgggtctgcactttggcccctataagggccgaatt
acagaagacgaagaggcggccaacaatggatactcctggctgatcaccaaggggagaaac
tgctatgagtatgtggacggaaaagataaatcctgggccaactggatgaggtatgtgaac
tgtgcccgggatgatgaagagcagaacctggtggccttccagtaccacaggcagatcttc
tatagaacctgccgagtcattaggccaggctgtgaactgctggtctggtatggggatgaa
tatggccaggaactgggcatcaagtggggcagcaagtggaagaaagagctcatggcaggg
agaggctgcagtgggtcatcccctcagagctgctccggtttccagatgagagagaatggt
tggcaggatgaaggtggggagcacggagaaccaaagccagagatccatccatgtccctca
tgctgtctggccttttcaagtcagaaatttctcagtcaacatgtagaacgcaatcactcc
tctcagaacttcccaggaccatctgcaagaaaactcctccaaccagagaatccctgccca
ggggatcagaatcaggagcagcaatatcctgatccacgcagccgtaatgacaaaaccaaa
ggtcaagagatcaaagaaaggtccaaactcttgaataaaaggacatggcagagggagatt
tcaagggccttttctagcccacccaaaggacaaatggggagctgtagagtgggaaaaaga
ataatggaagaagagtccagaacaggccagaaagtgaatccagggaacacagccaaatta
tttgtgggggtaggaatctcaagaattgcaaaagtcaagtatggagagtgtgggcaaggt
ttcagtgttaaatcagatgttattacacaccaaaggacacatacaggggagaagccctat
gtctgcagggagtgtgggcggggctttagctggaagtcacacctcctcagtcaccagagg
acacacacaggggagaagccctatgtctgcagggagtgtgggcggggctttagcgttaag
tcaagcctcctcagtcaccagaggacacacacaggggagaagccctatgtctgcagggag
tgtgggcggggctttagccagcagtcaaacctcctcagtcaccagaggacacacacaggg
gagaagccctatgtctgcagggagtgtgggcggggctttagcgttaagtcaagcctcctc
agtcaccagaggacacacacaggggagaagccctatcgtcatgcaagggggagtgtgggg
cgggggctttag
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