Pan troglodytes (chimpanzee): 468201
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Entry
468201 CDS
T01005
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X2
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04721
Synaptic vesicle cycle
ptr04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
468201 (SLC6A4)
04721 Synaptic vesicle cycle
468201 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptr02000
]
468201 (SLC6A4)
Transporters [BR:
ptr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
468201 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
468201
NCBI-ProteinID:
XP_001135066
Ensembl:
ENSPTRG00000008958
VGNC:
9626
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All DBs
Position
17:26002540..26046859
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AA seq
672 aa
AA seq
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MSQSRRVNPDDRELGGDPQIQAPRYQLGSLADGHQCYLLTSRMETTPLNSQKQLSACEDG
EDCQENGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTRHSIPAATTTLVAELHQGE
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGIPLFYMELA
LGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQLPWT
SCKNSWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALC
IMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQ
KLLETGVWIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFV
IFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDS
TFAGLEGVITAVLDEFPHIWAKRREWFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATG
PAVLTVALIEAVAVSWFYGITQFCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLM
SPPQLRLFQYNYPYWSIILGYCIGTSSFICIPTYIAYRLIITPGTFKERIIKSITPETPT
EIPCGDIRLNAV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcccgacgtgtcaatcccgatgatagagagctcggaggtgatccacaaatc
caagcacccagatatcaattgggatccttggcagatggacatcagtgttatttactaacc
agcaggatggagaccacacccttaaattctcagaagcagctatccgcgtgtgaggatgga
gaagattgtcaggaaaacggagttctacagaaggttgttcccaccccaggggacaaagtg
gagtccgggcaaatatccaatgggtactcagcagttccaagtcctggtgcgggagatgac
acacggcactctatcccagcggccaccaccaccctagtggctgagcttcatcaaggggaa
cgggagacctggggcaagaaggtggatttccttctctcagtgattggctatgctgtggac
ctgggcaatgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctc
ctcccctacaccatcatggccatttttgggggaatcccgctcttttacatggagctcgca
ctgggacagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttc
aaagggattggttatgccatctgcatcattgccttttacattgcttcctactacaacacc
atcatggcctgggcgctgtactacctcatctcctccttcacggaccagctgccctggacc
agctgcaagaactcctggaacactggcaactgcaccaattacttctccgagggcaacatc
acctggaccctccattccacgtcccctgctgaagaattttacacgcgccacgtcctgcag
atccaccggtctaaggggctccaggacctggggggcatcagctggcagctggccctctgc
atcatgctgatcttcactgttatctacttcagcatctggaaaggcgtcaagacctctggc
aaggtggtgtgggtgacagccaccttcccttatatcatcctttctgtcctgctggtgagg
ggtgccaccctccctggagcctggaggggtgttctcttctacttgaaacccaattggcag
aaactcctggagacaggggtgtggatagatgcagccgctcagatcttcttctctcttggt
ccgggctttggggtcctgctggcttttgctagctacaacaagttcaacaacaactgctac
caagatgccctggtgaccagcgtggtgaactgcatgacgagcttcgtttcgggatttgtc
atcttcacagtgctcggttacatggctgagatgaggaatgaagatgtgtctgaggtggcc
aaagacgcaggtcccagcctcctcttcatcacgtatgcagaagcgatagccaacatgcca
gcgtccactttctttgccatcatcttctttctgatgttaatcacgctgggcttggacagc
acgtttgcaggcttggagggggtgatcacagctgtgctggatgagttcccacacatctgg
gccaagcgccgggagtggtttgtgctcgccgtggtcatcacctgcttctttggatccctg
gtcaccctgacttttggaggggcctacgtggtgaagctgctggaggagtatgccacgggg
cccgcagtgctcactgtcgcgctgatcgaagcagtcgctgtgtcttggttctatggcatc
actcagttctgcagggacgtgaaggaaatgctcggcttcagcccggggtggttctggagg
atctgctgggtggccatcagccctctgtttctcctgttcatcatttgcagttttctgatg
agcccgccacaactacgacttttccaatataattatccttactggagtatcatcttgggt
tactgcataggaacctcatctttcatttgcatccccacatatatagcttatcggttgatc
atcactccagggacatttaaggagcgtattattaaaagtattaccccggaaacaccaaca
gaaattccttgtggggacatccgcttgaatgctgtgtaa
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