KEGG   Puccinia triticina (wheat leaf rust): PtA15_18A216
Entry
PtA15_18A216      CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03020  RNA polymerase
ptrc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PtA15_18A216
  09124 Replication and repair
   03420 Nucleotide excision repair
    PtA15_18A216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrc03021]
    PtA15_18A216
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_18A216
Transcription machinery [BR:ptrc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PtA15_18A216
  RNA polymerase III system
   RNA polymerase III
     PtA15_18A216
  RNA polymerase I system
   RNA polymerase I
     PtA15_18A216
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PtA15_18A216
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 77805628
NCBI-ProteinID: XP_053028713
LinkDB
Position
18A:join(1688625..1688659,1688759..1688917,1689022..1689129,1689220..1689379)
AA seq 153 aa
MSDAGDDYGNGGDMGEIHDLVGSEEDYGGEDGRELEEDVNGDVNGHLEGGENSANAQGVV
HSGMPGEGALAGQPNKVRTTTPYMTKYERARILGTRALQISMNAPVLVPLDGESDPLEIA
MKELSQRKIPLIVRRFLPDGSYEDWSVSELIAD
NT seq 462 nt   +upstreamnt  +downstreamnt
atgtcagatgccggcgatgattacgggaatggcggtgatatgggtgaaattcatgatctc
gtaggatcagaagaggactacgggggcgaggacgggcgggaattagaagaagacgtgaac
ggagacgtgaacggacatctcgaaggcggagaaaattcagcaaatgcccagggagttgtc
cacagtggaatgcctggagaaggtgctttagctggacaacccaataaggttagaacgaca
acaccatatatgactaaatacgaacgagctcgaatactgggcactcgagccctccaaatc
agtatgaatgcaccagtcttagttcctcttgacggtgaatcagatccgctggagatcgcc
atgaaagaacttagtcaacgcaaaatccccctgatagtccgtcgttttctccccgatgga
agctatgaagactggagcgtcagtgaattgatcgccgattga

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