KEGG   Puccinia triticina (wheat leaf rust): PtA15_1A482
Entry
PtA15_1A482       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03020  RNA polymerase
ptrc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PtA15_1A482
  09124 Replication and repair
   03420 Nucleotide excision repair
    PtA15_1A482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptrc03021]
    PtA15_1A482
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_1A482
Transcription machinery [BR:ptrc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PtA15_1A482
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PtA15_1A482
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD zf-ISL3 DZR
Other DBs
NCBI-GeneID: 77806409
NCBI-ProteinID: XP_053016698
LinkDB
Position
1A:join(3989065..3989342,3989436..3989481,3989587..3989645,3989812..3989840,3989946..3990256)
AA seq 240 aa
MIRVNFYGRSARICYILELSPHSSLLDQRAMCQMRSDENLGFKIYWQQQADKVHKVLTYA
CRNCVYFEEAAQTEEERGEKWLVYRNDLMAESKETAGVTQDLHTDPTLPRSRITCPYCKH
RADILHGTQDQSKRNLTTMTLFYVCTSCNKPFQVTVPVYPSSTIFPAFPLDLKFSAMHFG
RIRCSREMRPKGQGIYSMLLTSIPWPADTNHVKSGMGLQTLLFYTIYSSSISILIISVKQ
NT seq 723 nt   +upstreamnt  +downstreamnt
atgatccgcgtcaatttttatggccgatcagcgcgaatctgctatatcctcgagttgagt
ccgcattcttctctcctcgaccagcgggccatgtgtcaaatgaggtctgacgagaacctg
ggttttaaaatatactggcaacaacaggcagataaagtgcacaaagtcttaacgtatgcc
tgtcggaattgtgtttactttgaggaagcggctcagacggaggaagaacgcggagagaag
tggctggtctaccggaatgatctgatggccgagtccaaagagaccgcgggtgtcactcaa
gatctccatactgatccgaccctgcctaggtcaagaatcacatgcccatattgtaagcat
cgcgcggatatcctccacgggacccaagaccaatcgaagcggaacctaacaacaatgaca
ttgttttatgtctgcacgtcttgcaataaaccttttcaggtgactgttccagtctatccc
tcctcgaccattttccctgccttcccacttgatctgaagtttagcgcgatgcattttggt
aggatccgatgctccagggaaatgcgacctaaaggccaaggcatatattcaatgttgctc
acatcaattccctggccagctgataccaaccatgttaagtcgggtatggggctgcagact
ctcctgttctacaccatttattcgtcgtccatctcgattttaatcatatcagttaagcaa
taa

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