KEGG   Puccinia triticina (wheat leaf rust): PtA15_2A179
Entry
PtA15_2A179       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PtA15_2A179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_2A179
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     PtA15_2A179
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV TFA2_Winged_2 AAA_29
Other DBs
NCBI-GeneID: 77807067
NCBI-ProteinID: XP_053017421
LinkDB
Position
2A:join(1563897..1563950,1564046..1564277,1564434..1564559,1564624..1564832,1564916..1565030,1565092..1565124,1565199..1565281,1565383..1565451,1565536..1565751,1565828..1565856,1565940..1566335,1566403..1566542,1566618..1567095,1567193..1567403,1567469..1567743,1567827..1567955,1568030..1568064,1568152..1568272,1568362..1568526,1568607..1568898)
AA seq 1135 aa
MSGSTSKASSKLKQSTLGGFFQKSAPVKKSTTALSSDSRANNLSSDPDTKPLAQSNDDMD
EDEDEGIVERSRTAARGKRKSVVVAGSSSEDEEPPASRSRLPASKKARYSCASSASGAST
PKSAGDGFSSHASTAGPSEADDDDLEDEDDNPGFKPKSKLLATKSTKSSSSTKLKSGQSA
TNPDKAAGGAEAPWKQGPWAFLRDIKDADGNPMGSPEYDPRTLHISKKDWASMTPFEVQF
WEIKRNHFDTVLFFQKGKFSELYEGDALIGHQEFDLKITKRVKMSMVGVPESSVDFWIAK
FLAKGYKVGKVDQCETALGAEMRNKGSLPASKYAKPPPQQKGSGKEIVRRELRSVVTSGT
IVDGSILTDDAATCLLAIKENYNSSDFPVFGVIIMDAATAEFNLTHFEDSANRTHLETIM
SRFKPKEILHEKSGLSPATLRVLRNTASSDCTWTALKSDEFLEPEECVCRLTELFQESGG
QIPEVFKSFNSKVETMQALGGLLWYLKQLNLDKDLLTCKNVKVMDAFRCSKTMHLDGKTI
SDLELLQSDGSEESRLLKLLNRCVTSFGKRLFRHWLCSPLQDADAIRARLDAVDFLMSHP
SFEKTFSALSGLPDLERLISRVHAGACTVPNFLKVLEAFKKIYKTTQELRQLIDETPAIL
LQELLDSLPDVEKLLQNLEDMFTLNDDRRELLPLEGKDESYDMALEEEREAEKALKAELK
AAKKLLKTEDVVYKDIGIKDIYQIQVSVKVKPPSNWTKMSGTKDCARYYSPQSAQLVKKL
KQAREKKSCALKDFHLKVFLAFDEDYLTWLQVVKSIAQLDCVLSLAKASIALGETTCRPQ
IVDSAEAMVKFVTLRHPCTVGRDDSDFISNDVSVGGDECRMILLTGPNMAGKSTLLRMTC
VATILAQIGCYVPAESAIISPVDRICTRMGASDHIFAHASTFKVEMDDACKILKEATSKS
LVILDELGRGTSTFDGHAIAFAVLHRLATHSNCLGFFATHYSALTEDFQAHANVATKYML
TNVDEVTREVVFLYKLASGVSPRSYGPHVAKMAGIPSKIVQRAISISEEFEKETKNRQLS
TKQSDHRLNLVLQADTAFLINLVKKGGFADPASVKENLNTLDRVLSGIQKFNFRN
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgagcggctcaacctcgaaagcgtcaagcaaactgaaacaatccacccttggtggcttt
ttccaaaaatcggctccagtcaagaagagcacaacagccctgtcctccgattcacgagcc
aacaaccttagtagtgatccggacacaaaacccctagcacagtcgaatgatgatatggat
gaagatgaagatgaagggatagtcgaaaggtctcgtactgccgcccggggcaagcgtaaa
agtgtcgtagtggctggtagctcgagcgaggatgaggagcctccagcatcgcgatctcgg
ctgcccgcaagcaagaaggcacgctattcatgtgcgtcatcggcttctggcgcctctact
cccaaaagtgctggggacggattctctagtcacgcgagtactgctggtcccagtgaagct
gatgatgatgacctcgaggatgaggatgataatcctggcttcaaacccaagtccaagctt
ttggccaccaagtctaccaaatcatcgtcgtctaccaaattgaagtccggacaatctgca
accaatcctgacaaagcagctggtggtgccgaagctccctggaaacaaggaccctgggct
tttctccgtgatataaaagatgccgatggaaacccgatgggatctccagaatatgatccc
agaacattgcacatttcgaaaaaagattgggcttctatgactccgttcgaggtccagttt
tgggaaatcaaacgaaatcactttgatacagtcttatttttccaaaaaggcaaattttcc
gagctttacgaaggagacgctttgattggacatcaggaatttgatctgaagataaccaag
cgtgtcaaaatgtctatggttggggtacccgaaagttcggtggatttttggattgcaaaa
tttcttgccaaaggctacaaggtcggaaaagtcgatcagtgtgagaccgccctgggtgcc
gaaatgaggaataaaggtagcctgcctgcctcaaagtatgctaagccaccaccacaacaa
aagggatcaggcaaggaaatcgtcagaagggagttgaggagtgtcgtcacttcgggcaca
atcgtcgacggtagtatattgaccgacgatgcagctacttgcttattagccatcaaggaa
aactacaactcttcggattttcctgtctttggtgtaataatcatggacgctgccacagcg
gaatttaacttgacacattttgaagactctgcaaacaggacacatctcgagaccatcatg
agtcggttcaaacccaaggagattctgcatgaaaaatctggtctatcgccggccaccttg
cgagtcctgcggaatacagcatcttccgattgtacttggaccgctctcaaaagcgacgaa
tttttggagcccgaagaatgtgtttgcagattgacggagctcttccaagagtccggaggt
cagatccctgaagtctttaaatctttcaatagcaaagtggaaaccatgcaagctctgggt
gggctgttgtggtacctcaagcaactgaacctcgacaaggatctgctcacttgtaagaat
gtcaaggtgatggatgcttttcgctgcagtaagaccatgcatctggacggcaagaccatt
tctgatcttgagctccttcaaagcgatggaagcgaagagagtcgactcttgaaattatta
aaccgctgtgttacctcgtttggcaaacgactttttagacattggctctgctctcctttg
caggacgctgatgcgattcgagctcgactggacgcggtagacttcctcatgagccacccc
tcctttgagaaaacgtttagtgctctttcgggcctgccggacttggaacgattgatcagc
cgagttcacgcgggtgcatgtaccgtacccaacttcctcaaggtactggaagcgttcaaa
aagatttacaaaaccactcaagagcttcgccagctcatcgatgagacaccagccatctta
cttcaagagttactggactcgctcccagatgttgagaagctactccagaaccttgaagac
atgtttaccctaaacgatgatcgtcgagaacttttacctcttgaaggaaaagatgagtct
tacgatatggctttagaggaagaaagagaggcggagaaggcgctcaaggctgaattaaag
gcggctaaaaagttgctcaaaactgaagatgtggtttacaaagatatcggaatcaaagat
atttatcaaattcaggtcagcgttaaagtcaagccgccgtcgaactggactaaaatgtca
ggaaccaaagattgcgcgcgttactatagcccacaatctgcccaacttgtcaaaaagctg
aaacaagcacgcgagaagaagtcatgtgcactcaaggatttccatttaaaggtttttctg
gcgtttgatgaggattatctgacctggctgcaagtggtcaagtcgattgcgcaattagat
tgcgtgctctccctggcgaaagcctcgattgcactgggcgaaacgacctgtcggccgcag
attgttgactcggctgaggcaatggtcaagtttgtcacgctccgacacccatgcactgtt
ggtcgagacgacagcgacttcatctcgaacgatgtctcggtgggcggagatgaatgtcgg
atgatcctcctcaccggtcctaatatggccgggaaatcaacattgcttagaatgacgtgt
gttgccactatcttggcacagatcgggtgctatgttcctgcggaaagcgcgatcatttct
ccggtcgaccgtatctgtactcgtatgggtgccagtgatcacattttcgcacatgctagt
acatttaaggtcgagatggatgatgcttgtaaaatccttaaggaggcgacttcgaaatcc
ctggtaatccttgatgaactcggtcgaggtaccagcacctttgatggacatgcgattgcg
ttcgccgtgttgcatcgactggcgacccattcaaactgtctgggcttctttgctactcat
tattcagcacttacagaagacttccaagcacatgccaatgtcgccactaagtacatgctc
accaatgttgatgaagtaactcgagaagtggtgtttctgtacaagctcgcttccggtgtc
tcgccgcgttcctatggaccgcatgtagccaagatggcagggattccaagcaagatcgtc
caacgggcaatctcaatcagtgaagagtttgaaaaagaaaccaagaaccgacagctttcg
actaaacagtctgaccatcgactcaacctagtcttacaagctgacaccgcattcctgatc
aatttggtcaagaaaggcggctttgctgatcccgcttctgtcaaggaaaacttaaacaca
ctcgaccgtgtcctaagtggcattcaaaagtttaactttcgtaactga

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