Pseudomonas tremae: I9H09_23515
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Entry
I9H09_23515 CDS
T08237
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
ptre
Pseudomonas tremae
Pathway
ptre00730
Thiamine metabolism
ptre01100
Metabolic pathways
ptre01240
Biosynthesis of cofactors
ptre04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
I9H09_23515 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
I9H09_23515 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptre03016
]
I9H09_23515 (thiI)
Enzymes [BR:
ptre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
I9H09_23515 (thiI)
Transfer RNA biogenesis [BR:
ptre03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
I9H09_23515 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UQB36435
LinkDB
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Position
complement(5241495..5242949)
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AA seq
484 aa
AA seq
DB search
MKLIVKVFPEITIKSPPVRKKFIRQLGKNIRTVLRELDADIVVGGVWDNLEVETRLTDPK
VLQGIRDRLSCMPGIANYLQVAEYPLGDLDDIVAKCKLHYADLLPGKMFSVRCKRAGKHD
FSSMDVEKYVGSKLRMQCGAAGIELKKPDLVVRMEIRDQRLFVVHDQHKGMGGYPLGALE
QTLVLMSGGFDSTVAAYQIMRRGLMAHFCFFNLGGRAHELGVMEVAHFIWKKYGSSQRVL
FVSVPFEEVLGEILQKVDNSHMGVVLKRMMLRAASAVADRLEIDVLVTGEAISQVASQTL
PNLSLIDAATDKLVLRPLVATHKQDIVDLATEIGTADFARHMPEYCGVISVNPKTNAKRN
RVEYEEKQFDMAILEQALERAKLVSIDRVIDDLSRNVDIEEVSQALAGQVIIDIRHPDAQ
EDQPLQVTGVEIQTLPFYALNSRFKALDDTRQYLLYCDKGVMSRLHAHHLLSEGHANVRV
YRPS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaatcgttaaagtttttccagaaatcaccatcaaaagcccgccggtgcgcaag
aaattcatccggcagctgggcaagaacattcgtaccgtgctccgtgaactggacgcggac
attgtcgtgggtggcgtatgggacaacctcgaggtcgaaacccgcctgactgaccccaaa
gtactgcagggcataagggatcggctgagctgcatgccgggtatcgccaactatctgcaa
gtggccgagtacccgctgggcgatctggatgacatcgttgccaagtgcaaactgcactat
gccgacctgctgccgggcaagatgttttcagtgcgttgcaagcgtgccggaaaacacgat
ttcagctcgatggacgtcgagaaatacgtcggcagcaagctgcgcatgcaatgcggcgct
gccggaatcgagctgaaaaagcctgatctggtcgtgcggatggaaattcgcgaccaacgg
ttgtttgtggttcatgaccagcataaaggcatgggcggctacccgctcggcgcgctggag
cagaccctggtattgatgtccggcggtttcgattcgaccgttgcggcctaccagatcatg
cgtcgcggcctgatggcgcacttctgcttcttcaatctgggcggacgtgcccatgaactg
ggcgtgatggaagttgcgcactttatctggaaaaagtacggcagctcgcagcgcgtgctg
tttgtcagcgtaccgttcgaggaagttctcggagaaattctgcagaaagtcgataacagt
catatgggtgtagttttgaagcgtatgatgttacgcgctgcatctgccgtggctgatcgt
cttgaaatcgacgtgctggtcaccggcgaagcgatttcccaggttgccagccagacgctg
cccaacctgtcgctgattgacgcggcgaccgacaagctggtcctgcggccgctggttgct
actcacaagcaggacatcgtggacctggcgactgaaatcggcaccgctgattttgcccgg
cacatgcctgagtattgcggggtgatctcggtcaaccccaagaccaacgccaagcgtaac
cgcgttgagtacgaagaaaaacagttcgacatggcgatcctcgagcaagcgctcgagcgc
gcgaagctggtttcgatcgatcgggtcatcgacgatctgagccgcaatgtcgacattgaa
gaagtcagccaggcgctggccggtcaggtcatcatcgacatccgtcacccggatgcccag
gaagaccagccgctgcaagtgaccggcgtggagatacagacgttgccgttctacgcattg
aacagccgcttcaaggcactggatgacacacgccagtacctgttgtattgcgacaaaggc
gtcatgagtcgcctgcatgcccaccatttgctcagtgaggggcatgccaatgtgcgcgtt
tatcgaccgagctaa
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