Pseudomonas triclosanedens: OU419_21060
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Entry
OU419_21060 CDS
T09689
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ptrl
Pseudomonas triclosanedens
Brite
KEGG Orthology (KO) [BR:
ptrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptrl03009
]
OU419_21060 (rimO)
Enzymes [BR:
ptrl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OU419_21060 (rimO)
Ribosome biogenesis [BR:
ptrl03009
]
Prokaryotic type
ribosomal protein modification factors
OU419_21060 (rimO)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
DUF4249
Motif
Other DBs
NCBI-ProteinID:
WAI48229
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Position
4550766..4552088
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEAIAENGKVIVTGCMGVSEDSIRDVHPSVLAVTGPQQYEQVVSAVHEVVPPKAD
HDPFVDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAQRL
VKAGVKELLVISQDTSAYGVDLKYKMDFWDGQPVKTRMLELCQALSAMGVWVRLHYVYPY
PNVDDVIPLMAEGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVDGAPANDLGLEPVPDDIKQERW
ERFMAHQQAISAARLQLKIGKEIEVLIDEVDDEGAVGRSFADAPEIDGAVYVDTFDVKPG
DKVRVRITDADEYDLWAELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacccccaaagtcggattcgtatcgctcggatgcccaaaggcgactgtc
gattccgaacgcatcctcacccagctgcgcatggaggggtacgagatcgtccccacctat
caggacgcagacgtggtggtggtgaacacctgcggcttcatcgacagcgccaaggccgaa
tccctggatgccatcggtgaagccatcgccgagaacggcaaggtaatcgtcaccggctgc
atgggcgtatccgaagacagcatccgcgacgtacaccccagcgtgctggcggtgaccggt
ccgcagcagtacgaacaggtggtcagcgccgtccacgaagtggtgccgcccaaggccgac
cacgatcccttcgtcgacctggtgccgccgcagggtatcaagctcaccccgcgccactac
gcctacctgaagatttccgaaggctgcaaccatagctgcagcttctgcatcatcccgtcg
atgcgcggcaagctggtcagccgcccggtgggcgacgtgctcagcgaggcccagcgcttg
gtgaaggccggcgtcaaggagctgctggtgatatcccaggacaccagcgcgtacggcgtg
gacctcaagtacaagatggacttctgggatggtcaaccggtcaagacccgcatgctggag
ctgtgccaggcgctctcggcgatgggcgtgtgggtgcgcctgcactacgtatacccgtac
cccaacgtcgatgacgtgatcccgctgatggccgaaggcaagctgctgccctatctggac
atcccgttccagcacgccagcccgaaggtgctgaagtcgatgaagcgcccggccttcgaa
gacaagaccctcgcgcgcatcaagaagtggcgcgagatctgcccggaactgaccatccgc
tccaccttcatcgtcggcttcccgggcgagaccgaggaggacttccagtacctgctggat
tggctgaccgaggcgcagctcgaccgcgtcggctgcttccagtattccccggtggacggc
gcgccggccaacgacctgggcctggagccggtaccggacgacatcaagcaggagcgctgg
gagcgtttcatggcgcatcagcaggcaatctccgccgcgcgtctgcaactgaagatcggc
aaggaaatcgaggtactgatcgacgaagtggacgacgaaggcgctgtaggccgctccttc
gccgacgccccggaaatcgacggtgccgtctatgtcgacaccttcgacgtgaaaccgggc
gacaaggtccgagtgcgaatcaccgacgccgacgaatacgacctttgggccgaactggtc
tga
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