Portunus trituberculatus (swimming crab): 123499229
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Entry
123499229 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus Notch protein-like
KO
K02599
Notch 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123499229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank
Ank_2
Notch
EGF_3
Ank_4
Ank_3
Ank_5
EGF_2
NOD
NODP
C8A_B_C6_EGF-like
DL-JAG_EGF-like
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
123499229
NCBI-ProteinID:
XP_045102926
LinkDB
All DBs
Position
49:19349490..19446092
Genome browser
AA seq
2531 aa
AA seq
DB search
MHVRAGIVLWVWCCLAHLAQGFISCSPNPCKNDGKCVSHPGAESSCQCTDEYVGEYCQHL
NPCRNGPGARCQNGGTCKAVLSVSGPSPKFECICPVGYQASLCEIAVANACDSDPCLNGA
TCQLVTLDTYRCQCPSGYRGEHCEKVDHCASKPCRNGATCHSTGSTFSCTCPPGFTGTTC
TTDVDECRDEPCRRGTCSNTFGSYTCNCEVGYTGANCESQYVPCEPSPCHNGGTCVARDA
FSYDCRCPSGFRGRNCEININDCERHMCQNGATCVDGVNTYTCACPPTFTGPYCTEDVDE
CAVRPTICKNGATCTNTVGGFSCICVNGWTGEVCSENIDDCTASACFNGATCIDRVGSYL
CQCTPGKTGLLCHLDDACASNPCHRGSLCDTSPTDGGYICTCPPGYKGVDCTEDIDECKE
GLPCEHNGTCVNTPGSFRCNCSKGFTGPRCEININECESNPCHNQGTCLDERGAFRCVCM
PGYTGQHCEEDVDECASHPCYNNGVCSDLINEYRCSCTQGFTGRQCHINIDDCASEPCQH
GGICIDRVAGYSCRCPPGFTGRNCETNIDDCLSSPCRQGTCIDGNNSFKCMCHPGYTGLL
CQTEIDECSSSPCQHKGTCKNLINGYKCDCPNGTAGMNCEHNINECFSNPCRNGAKCKDG
INEYSCECEPGYTGRHCETNIDDCLSQPCANGGRCIDMVNGFRCQCPSGYYDARCLSNVN
ECASDPCLNGGSCYDDVNRFNCKCPPGFTGHRCEHEIDECQSNPCQHGGTCHDALNMYTC
SCXPGYSGRNCEVNIDDCQSRPCRNGGTCIDLVNSYKCVCELPHTGKNCEVRMDPCSPNK
CRHDARCMPTANFVDFTCECNLGYTGRLCDEDINECSVSPSPCKNGATCRNTNGSYSCDC
AVGYEGRECTINTNDCAPQPCLNGGTCLDGIGDYTCLCVDGFGGTNCEHDLNECDSNPCQ
NNATCNDYVNSYTCTCRLGFSGTNCEINDEDCTPTSCMNNGSCIDGINNYTCECMMGFTG
SHCQHRINECHSNPCKNGGTCSDHDGFFTCHCQYGYTGEQCENLVDWCTPTPCFNNGVCK
QTKNRYKCVCPLGWTGLLCDVEMVSCATAAASKDVSPSELCLHDGKCHDIGNTHRCECAP
GYTGSYCQHEIRECDSQPCMNGATCNDHVGTYSCTCRPGFQGLDCEYNVDDCKPNNPCQN
GGVCHDQVNGFQCSCPHGTLGKLCEINTNDCYEGACHNGGTCVDKVGGFECDCKAGYVGT
RCEGDVNECLSSPCVSEGTADCIQLVNDYRCNCKLGYMGRHCESKRDFCAEAPCQNGGVC
NNNNVDYSCHCPDGFTGKSCEFPSDNCASNPCRPGEICRPYERGAECXPQEEKVTSCSPN
PCLHGGNCLDRITFFECHCPPTWNGKMCEVHNPTFKGGIGKPVITFISNITLEREGCEIH
RCEEKKNNNKCDKECATPACDYDGYECSLGRDPWGMCQAPINCVEVFGNGVCNTECNNSE
CLFDGMDCKKPLDSCNPIYDAYCQTNYGNGHCDQGCNTEECGWDGLDCEMEPPSILQEGL
QIVVETDKATFMMVKKAFTRSLSTELRAHLSIKLGKSGEEMIYTYNRDGIQGLLVYFDID
TRRCERENQCLGTVTDMANFLAANRLRLGSYHDVPIAKVYEDMPLDPTPGYAYVIVGIVF
TMVLVGIIFMVITNNRKRARGITWFPEGFFPKYNTPQGTEPARRKPDGQEMRSFSKGASM
HHLADLADGEGPGPPMAIPGPMADWSDDDSEHPPTKRSRHEAGYSDQTHLTDYDDANDPR
VWTQQHLDAADIKNPDLLALTPPQTEPEDQRGLAGEVDPKGPMGLTPLMIASFRGGGLES
HTDEDDKDGSAAVIQELIEQGAKLNAKMDRTGETSLHLAARYARADAAKRLLDAKADANA
QDATGRTPLHAAVAADAQGVFQILLRNRSTDLNAKMNDGTTPLILAARLAIEGMVEDLIN
ADADINAADDLGKTALHWAASVNNVEAVQILLAHGANRDAQNNRDETPLFLAAREGSYEA
CKILLDHFANRDITDNMERLPEDVANERLHHDIVRLLREHHPRSPQMAQVVNTSHLVSQQ
NQQAGNVLTQQMTPQPAQRTNTQPKAKARRPKSSVMSLPGGSINTPVSPDGTVSIKRSSS
IKKKREASGVPSVDSQTQLSPLNSTGSPHGVFEAASSPFETGLFSGGLGGVNPHFPDLGV
AQPPPYEESVKAAASMNNLQQIGVRDNNPFSFASLIEGHPHHQGHVVHQRQQSMPASFSP
QSQTTSPPHHMTPPHSSPQHVHSPHAQGHATSPGKMRPALPTSPTHMAALRHATATSGFE
FPTSSGAAYSLPGQQQQQQQQQQPPPPPQQHQLQQAQAHHQQKQQQQQMQQHHQHQGSSG
FYPHYPTPPSQHSGVEATPQHSHGAAQAAHDAFPTPSPESPGQWSSASPRSQSDWSEGVR
SPLGPPGLPPIHPLYPNTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGQPQGPLQP
LGLPSQGSIYI
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtacgcgcagggattgtcctgtgggtatggtgctgtctggcccacctcgcccag
ggcttcatctcgtgttccccaaacccctgcaagaatgatggcaaatgtgtgtcccacccc
ggagcggagtcttcgtgccagtgcacggacgagtacgtcggggagtactgccagcacctc
aacccgtgccggaacggtcccggggctcgctgtcagaacggcggcacctgcaaggccgtg
ctctcggtgtccggccccagccccaagtttgaatgcatctgtcccgtggggtaccaggcg
tcgctgtgtgagattgcagtggccaacgcctgtgattccgacccgtgcctcaatggcgcc
acttgccagttagtaaccctcgacacctaccgctgccagtgcccctctggctaccgcggc
gagcattgcgagaaggtggaccactgcgcctccaagccgtgccgcaacggtgccacctgc
cactccacaggctccactttcagctgtacctgcccgccaggcttcaccggcaccacctgc
accaccgacgtggacgagtgtcgcgacgagccctgtcgacgaggcacctgcagcaatacc
tttggctcctacacatgtaactgcgaggtgggctacactggcgccaactgtgagagtcaa
tacgtgccgtgcgagccgtcgccgtgccacaatggcggcacctgtgtggcgcgggacgcc
ttctcctacgactgtcgctgcccttccggattcagaggcaggaactgcgagatcaacatt
aacgactgcgagaggcatatgtgccaaaatggcgcgacgtgcgtggatggcgtcaacacg
tacacgtgcgcgtgtccgccaaccttcaccgggccgtactgcactgaggacgtggatgag
tgtgctgtgcgccccactatttgcaagaacggcgccacctgtaccaacactgtgggcggc
ttctcctgcatctgtgtgaatggctggacaggagaggtgtgctctgagaacatcgacgac
tgcacggcctctgcttgtttcaacggcgccacctgcatcgaccgcgtgggctcctacctg
tgccagtgcacgccggggaagacgggcttattgtgccacctggacgacgcctgtgccagc
aatccgtgccatcgcggctccctgtgtgacacctcgcccaccgacggcggttacatatgc
acgtgtccgccaggctacaagggcgttgactgcacggaggacatcgacgagtgcaaggag
ggtttgccttgcgagcacaatggcacctgcgtcaacactccgggctccttcaggtgtaac
tgctccaagggcttcacagggccgcgctgcgagatcaacatcaatgagtgcgagagcaac
ccgtgccacaaccagggcacatgtctggacgagcgcggtgcctttcgctgtgtgtgcatg
ccaggctacactggccaacactgtgaagaagacgttgatgaatgtgcctcccacccatgc
tacaacaatggagtgtgcagcgacctcatcaacgagtaccggtgcagctgtactcagggc
ttcactggccgccagtgtcacatcaatattgacgactgtgcttcagagccttgccaacat
gggggaatctgcattgatagggttgctggttacagttgtcgctgcccaccaggctttact
ggcaggaactgtgagaccaacattgacgactgtctgtcttctccctgccgccaaggaacc
tgcatcgacgggaacaactccttcaagtgcatgtgtcacccaggctacacgggcctcctg
tgtcagacggaaattgacgagtgcagctcctctccgtgtcagcacaaggggacgtgcaag
aacctcatcaatggctacaagtgtgactgtcccaacggcacagccggaatgaactgtgag
cacaacatcaacgagtgcttcagcaatccgtgtcgcaacggtgccaagtgcaaggacggg
atcaacgagtacagctgtgagtgtgagccaggctacaccggcaggcactgcgagaccaac
attgatgattgcctgtcccagccatgtgccaacggaggccggtgcatcgacatggttaat
gggttccgctgccagtgcccatccggttactacgatgctcgttgcctctccaatgtcaac
gagtgtgccagcgacccctgccttaatggtggttcctgctacgatgatgtcaacaggttc
aactgcaagtgtccaccggggttcactggccaccgctgtgaacacgagattgacgagtgc
cagtccaacccatgccagcatggcggcacctgccatgatgccctcaacatgtacacctgc
tcatgtnccccgggctactccggcagaaattgtgaggtaaatattgatgactgccagagt
cgtccatgcaggaatggtggcacttgcattgacttggtgaactcctacaagtgtgtgtgt
gagctcccccacactggcaagaactgtgaggtgcgcatggacccatgctccccaaacaag
tgccggcacgatgcccgttgcatgcccacagcaaactttgtggactttacttgcgagtgc
aacttgggctacaccggccgcctctgtgatgaggacatcaacgagtgcagcgtgtcccca
tcgccctgcaagaatggcgccacctgtcgcaacaccaatggctcctactcctgtgactgt
gctgtgggctacgagggccgggagtgcaccattaacaccaatgactgtgctccgcagccc
tgcctcaacggcggcacttgcctagacggcatcggggattacacctgcctgtgtgttgac
gggttcggtggcaccaactgtgaacacgatctcaacgagtgcgactcaaatccttgccag
aacaatgccacctgcaacgactacgtcaactcctacacctgcacctgtcgccttggcttc
tccggaacaaattgtgagattaatgatgaagattgcactccaacatcctgcatgaacaat
ggaagctgcattgacggcatcaacaactacacctgcgagtgcatgatgggcttcactggc
tcccactgccagcaccgcatcaacgagtgccattctaacccttgcaagaatggtggcacc
tgcagtgaccatgatggcttcttcacctgccactgtcagtatggctatactggggaacag
tgtgaaaacctggtggactggtgcacacccaccccctgcttcaacaacggtgtgtgcaag
cagaccaagaaccgctacaagtgtgtgtgtccactgggctggactggcctgctgtgtgat
gtggaaatggtgtcctgtgccactgcagctgccagcaaggacgtgagtccctcagaatta
tgccttcacgatggcaagtgccacgacattggcaacacccaccgctgcgaatgtgccccg
gggtataccggctcctactgccagcatgagatacgggagtgcgactcccagccatgcatg
aatggtgccacctgcaatgaccatgtgggcacctactcttgcacctgccggccgggcttc
caaggcctggactgcgagtacaatgttgatgactgcaagcctaacaatccctgccagaat
ggaggagtctgccacgaccaggtgaatggcttccagtgttcctgtccccacggaactctt
gggaagctgtgcgagatcaacaccaatgattgctatgagggagcctgtcacaatggcggg
acttgtgtggataaggttggtggatttgagtgcgactgtaaggcaggctacgtgggcacc
aggtgtgaaggggatgtaaatgagtgcctgtcatccccctgtgtgtctgagggcactgct
gactgcatccagcttgtcaatgactaccgttgcaactgtaagctgggatacatgggacgg
cactgtgagagcaagagggacttttgtgcggaggcaccctgccagaatggaggagtctgc
aacaataacaatgtggactactcttgtcactgccctgatggattcacaggaaagtcctgc
gagttcccaagcgacaactgtgcctccaatccatgccggccaggagagatctgccgcccc
tatgagcgcggcgctgagtgcnatcctcaggaggaaaaggtcacctcctgtagccccaac
ccatgtctgcatggtggcaactgtctggacaggatcaccttctttgagtgccactgtcct
ccaacctggaatggcaagatgtgtgaggtgcacaacccaactttcaaaggtggcattggt
aagccagtcatcacctttatctccaacattactctggagagagaggggtgtgaaatccac
cgctgtgaagaaaagaagaacaacaataagtgtgacaaagagtgtgcaactccagcctgt
gactatgatggctacgagtgttccttggggagggacccgtggggaatgtgtcaggctcca
ataaactgtgtggaagtctttggaaatggagtttgtaacactgaatgcaataacagtgag
tgcctctttgatggtatggactgcaagaagcccttggattcttgcaatccaatctacgat
gcttactgccagaccaactatggcaacggccactgcgaccaaggctgcaacactgaggaa
tgtggctgggacggcctggactgtgagatggagccgccatccatactgcaggaaggactc
cagattgtagtagagactgacaaggccacattcatgatggtgaagaaggccttcacacgc
tcactgagcactgagctccgggcacacctctccatcaagttgggcaagtctggcgaggag
atgatctacacttacaacagggatggcatccagggcctgctagtgtactttgacattgac
acccgtcgctgcgagagggagaaccagtgcctgggaactgtcaccgatatggcaaacttc
ctggcagccaaccgtctgcgtctggggagctaccatgacgtgcccattgccaaggtgtat
gaggacatgcccctggatcccacacctggctatgcctatgtcattgttggcattgtcttt
accatggtgttggtgggcatcatcttcatggtcattactaacaaccgcaagcgtgccaga
ggcatcacctggttccccgagggattcttccccaagtacaacacaccacaggggaccgag
ccagcccgcaggaagccagacggccaggagatgcgcagcttcagcaaaggggcctccatg
caccatctggctgacttggctgatggagagggtccaggccctcccatggctatcccagga
ccaatggcagactggtccgacgacgacagcgaacacccgcccaccaagaggtcaaggcat
gaggcgggctactcagaccagacacacctcaccgactacgatgatgctaatgacccacgt
gtgtggacgcagcagcacctggatgctgctgacatcaagaatccagacctccttgctctc
actccaccccagactgagccggaggaccagcggggcctggctggtgaggtggatcccaag
ggccccatgggcttgacgccactcatgattgcctccttccgtggaggcggcctagagagc
cacacggatgaggatgacaaggatgggtcagcagcagtgatccaggagctgatagagcaa
ggcgccaagctcaatgccaagatggatcgcactggggagacttccctccacctagctgcc
aggtatgccagagctgatgcagccaagcgcctgctggatgccaaggctgatgccaatgcc
caggatgccactggccgcacaccactgcatgctgctgtggctgctgatgcccaaggagta
ttccagatcctcctgaggaatcgatccactgacctgaacgccaaaatgaacgacggcacc
acaccactcatcctggcggcacggctggccatcgagggaatggtggaggacctcatcaat
gctgatgctgacatcaatgctgcagatgatctgggcaagacagcgctgcattgggcagcc
tctgtcaacaatgtggaggcagtacagatcttgctggcccatggagcaaacagggatgct
cagaacaacagggatgagactcctttattccttgctgcccgggaggggagctatgaggcg
tgtaagatcctgctggaccactttgctaaccgggacatcaccgacaacatggagcgcctg
cctgaagacgtggccaacgaacggctgcaccacgacatcgtgcgtctgctacgggagcac
catccccgttctccccagatggcccaggtggtcaacacttcccatctggtgtcacaacag
aaccagcaagctggaaatgtgctcacccagcagatgacaccacagccagcacagcgaacc
aacactcagcccaaggccaaggctcggcggccaaagtcctcagtcatgtccctacctggc
gggtccatcaacactcccgtcagccccgatggcaccgtctccatcaagcgcagttccagc
atcaagaagaagcgggaagcctcaggtgtgccaagtgtggactcacagacacagctgtca
ccactgaactcaacgggatcgccacatggggtgtttgaggcagcctccagccccttcgag
acaggtctgttttctggcggcctgggtggtgtcaacccccacttccctgacctgggtgtg
gcacagccacctccctacgaggagtctgtcaaggctgcagcttccatgaacaacctacaa
cagattggtgtgcgtgacaacaatcctttcagttttgccagcctgattgagggccacccc
catcaccagggccatgtggtgcaccagcggcagcagtctatgccagcttccttctcccca
cagagccagaccacctctccccctcatcacatgactcctcctcactcatctccccagcat
gtccactctcctcatgcccagggccatgctacctcccctggcaagatgcggccagcgctg
cccacctcccccacccacatggcagccctcaggcacgccacagccacctcgggatttgag
tttccaaccagtagtggggctgcgtatagtctgcctggccagcagcagcaacaacagcag
cagcagcagccccctcctccacctcagcaacaccagcttcagcaggcacaggctcaccac
caacagaaacagcagcaacagcagatgcagcagcaccaccaacaccaaggtagcagtgga
ttctacccgcactatcccacccctccctcacagcactcgggggtggaggccacaccccag
cactctcatggggcagcacaggctgctcatgacgccttccccaccccttccccagagtcc
cccggccagtggtcttctgcttccccacgcagccagagtgactggtcagagggggttagg
tctcctctgggaccccctggtctgccaccaatacacccactgtatcccaatacccaacag
cagcagcaacaacaacagcaacaacaacagcaacagcaacaacaacaacaacagcagcag
caacaacaacagcaacagcaacagcaacagcaggggcaaccacagggtcccctgcagcct
ctaggattgccttcccaaggctccatctatatttag
DBGET
integrated database retrieval system
